| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spro_0099 |
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| Symbol | xylF |
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| ID | 5605677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Serratia proteamaculans 568 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009832 |
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| Strand | + |
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| Start bp | 106406 |
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| End bp | 107401 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640935584 |
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| Product | D-xylose transporter subunit XylF |
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| Protein accession | YP_001476337 |
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| Protein GI | 157368348 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02634] D-xylose ABC transporter, substrate-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTCA AACCTGTGTT CCTTTCGGTC TGTGCGCTGC TGGCGCTGGC GAGCCAACCG
GCGCAGAGCA AAGAAGTCAA AATCGGCATG GCGATCGACG ACCTGCGCCT GGAGCGCTGG
CAGAAAGACC GCGACATCTT CGTCAGCAAA GCCAAAGCGC TGGGGGCGGA TGTGTTTGTT
CAGTCGGCCA ATGGCAATGA AGAAACCCAG ATGGCGCAGA TTGAAAATAT GATCAACCGC
GGCGTCGACG TGCTGGTGAT TATTCCCTAC AACGGCAAGG TGTTGAGTAA CGTCATCAGC
GAAGCCAAGC GGGAAGGCAT TAAGGTGTTG GCTTACGATC GCATGATCAA TAACGCCGAT
ATCGATTTTT ACATCTCCTT TGATAATGAA AAGGTCGGTG AGCTGCAGGC GCAAAGCCTG
GTGCAGCGGG TGCCGCAGGG CAATTATTTC CTGATGGGCG GCTCGCCGGT GGATAACAAC
GCCAAGCTGT TCCGCCAGGG ACAGATGAAG GTGCTGCAAC CGCTGATTGA CGGCGGGAAA
ATCAAAGTGG TGGGCGATCA GTGGGTCGAC GGATGGTTGC CGGAAAACGC ATTAAAAATC
ATGGAAAATG CGCTGACCGC CAACAATAAC AAGATTGACG CGGTAGTGGC TTCCAACGAT
GCCACCGCCG GCGGCGCTAT CCAGGCGCTG GCCGCGCAGG GCCTGGCGGG CAAGGTGGCT
ATTTCCGGTC AGGATGCCGA TTTGGCGGCG GTGAAGCGCA TTGTCGCCGG TACCCAGACC
ATGACGGTGT ATAAGCCAAT CAGCAAACTG GCCGACGAGG CGGCGGGCAT CGCGGTGCAA
CTGGGCAAGG GTGAACAGCC GAAGGCTAAC GCCACATTAA ATAACGGCAG CAAAGACGTG
CCATCCTGGT TATTAACCCC TATTCCGGTT GATAAATCGA ATATCGACAG CACCATTGTT
GCCGACGGTT TCCATAAAAA AGCCGAGATT AATTAA
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| Protein sequence | MKFKPVFLSV CALLALASQP AQSKEVKIGM AIDDLRLERW QKDRDIFVSK AKALGADVFV
QSANGNEETQ MAQIENMINR GVDVLVIIPY NGKVLSNVIS EAKREGIKVL AYDRMINNAD
IDFYISFDNE KVGELQAQSL VQRVPQGNYF LMGGSPVDNN AKLFRQGQMK VLQPLIDGGK
IKVVGDQWVD GWLPENALKI MENALTANNN KIDAVVASND ATAGGAIQAL AAQGLAGKVA
ISGQDADLAA VKRIVAGTQT MTVYKPISKL ADEAAGIAVQ LGKGEQPKAN ATLNNGSKDV
PSWLLTPIPV DKSNIDSTIV ADGFHKKAEI N
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