Gene Spro_0016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpro_0016 
Symbol 
ID5607089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSerratia proteamaculans 568 
KingdomBacteria 
Replicon accessionNC_009832 
Strand
Start bp15342 
End bp16076 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content56% 
IMG OID640935501 
Producttranscriptional regulator PhoU 
Protein accessionYP_001476254 
Protein GI157368265 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0704] Phosphate uptake regulator 
TIGRFAM ID[TIGR02135] phosphate transport system regulatory protein PhoU 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.417309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.132936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACC TGAATTTAAA TAAACACATT TCCGGCCAGT TCAACGCAGA ACTTGAGCAC 
ATCCGCACCC AGGTGTTGAC CATGGGCGGG CTGGTGGAGC AGCAATTGAC CGACGCCATT
ACCGCGATGC ACAACCAGGA CGGTGAGTTG GCCAAGCGGG TGATCGAAGG CGACGCCAAG
GTCAATATGA TGGAAGTGGC GATCGACGAG GCCTGCGTGC GCATCATTGC CAAACGCCAG
CCGACCGCCA GCGACCTGCG CCTGGTGATG GCGATCATCA AAACCATCTC CGAGCTGGAG
CGTATCGGCG ACGTGGCGGA CAAAATCTGC CGCACCGCGC TGGAAAAGTT CTCGCACCAG
CACCAGCCAC TGTTGGTCAG CCTGGAGTCG CTGGGCCGCC ACACCGTGCA GATGCTGCAT
GACGTGCTGG ACGCCTTCGC GCGTATGGAT CTGGATGAAG CGATCCGAAT TTACCGCGAA
GACAGGAAGG TCGATCAGGA ATATGAAGGC ATCGTGCGTC AGTTGATGAC TTACATGATG
GAAGACACAC GCACCATTCC CAGCGTGCTG ACTGCGTTGT TCTGCGCCCG TTCAATCGAG
CGTATCGGTG ACCGTTGCCA GAACATCTGC GAATTTATCT TCTATTTCGT GAAAGGCCAG
GACTTCCGTC ATATTGGTGG CGATGCGCTG GAAAAACTGT TGTCCTCCGA CGGTAAAGAC
GAGGAAAAAG AGTAA
 
Protein sequence
MDNLNLNKHI SGQFNAELEH IRTQVLTMGG LVEQQLTDAI TAMHNQDGEL AKRVIEGDAK 
VNMMEVAIDE ACVRIIAKRQ PTASDLRLVM AIIKTISELE RIGDVADKIC RTALEKFSHQ
HQPLLVSLES LGRHTVQMLH DVLDAFARMD LDEAIRIYRE DRKVDQEYEG IVRQLMTYMM
EDTRTIPSVL TALFCARSIE RIGDRCQNIC EFIFYFVKGQ DFRHIGGDAL EKLLSSDGKD
EEKE