| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4194 |
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| Symbol | |
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| ID | 5664578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 5088869 |
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| End bp | 5089876 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238858 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001504039 |
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| Protein GI | 157964005 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0109567 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACGAA TCGTAGTGCT AGCGGCCGAC AATGCGGTGG CGGGGGGCAT TCTGAGTTTT
ATGGATGTAT TCAGTTTCTG TAATACCTAC TGGAAAGTGA CTCATCCCGA TGCCGATGAG
GTGTTATTTG AGTGTGCGAT TATTTCGCCC GATGGTGAGC CGATTAACAG CGATCATAAT
ATGCAGCTGC CAGTCATAGC CCATGATGAA GCCGATCATT ACTTTAGTCA TGCCGACGCC
TTAGTCGTCG CTTCGGCGAC TATCACTAAT CGTAAGCAGC TCAACACCTA CCTAGATGAT
TTTCAACCCC ATATTGCGAC CCTAAAAAAA TTTGCCCAGA CCAATAAACC GATAGCGGCC
TATTGTTCGG GCACCTTAAT GTTGGCGGCT TCTGGTTTGC TCGACGATAA GAAGGCCACC
TGCGTATGGT GGTTAGCCGA GTTGTTTAGG CGTAGCTTTC CTAGGGTTGA TTTATGTAGT
GAGCACGTGG TCATGAACGA CGGTCAGTAC TATACGGCGG GAGCCACCAG TGCCAACTTG
AGTTTGGCGT TGCAACTGGT ACAAAAATTG GCGGGAGAGC AAATTGCGAT GCAGATGGCT
AAAGTGCTGC TTATCGATCC GAATCGAACC TCGCAACAAG CTTTTGTGAC CTTAGATGCT
GAGCCGCAAC ATAAAGATGA GCTAGTGACT CGTATTCAAG ATTGGATGCA GTTGCACCTT
AAGCATCACT TGCAGTTAGA TGACATTGCC GACAAATTTG CCGTGGGAAA GCGCACCTTG
ATCCGCCGTT TTAAGAGTGC GGTTAATCAA ACGCCTGCCA GCTATATTCA GCGGCTTAGG
GTCGATGAGG CTAAGCGCTT ACTCGAAACG ACTGCGTTCA GTATAGAGCA GATAGTCGAA
CAGGTCGGCT ATGAGGATGT GAGTTCCTTT AGGAAGCTAT TCATACAAAC CACAAGCTTG
TCGCCGCGAG CTTATCGCCA AAAGTTTAAT ACTCATGACT GCTGCTAA
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| Protein sequence | MKRIVVLAAD NAVAGGILSF MDVFSFCNTY WKVTHPDADE VLFECAIISP DGEPINSDHN
MQLPVIAHDE ADHYFSHADA LVVASATITN RKQLNTYLDD FQPHIATLKK FAQTNKPIAA
YCSGTLMLAA SGLLDDKKAT CVWWLAELFR RSFPRVDLCS EHVVMNDGQY YTAGATSANL
SLALQLVQKL AGEQIAMQMA KVLLIDPNRT SQQAFVTLDA EPQHKDELVT RIQDWMQLHL
KHHLQLDDIA DKFAVGKRTL IRRFKSAVNQ TPASYIQRLR VDEAKRLLET TAFSIEQIVE
QVGYEDVSSF RKLFIQTTSL SPRAYRQKFN THDCC
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