| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4052 |
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| Symbol | |
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| ID | 5664436 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4922889 |
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| End bp | 4923767 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238716 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503897 |
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| Protein GI | 157963863 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGGA CGATTGATGA GCTCAATGCA TTTGTAAATT CGGTAAAGCT AGGCTCATTT
TCGGCGGCAG CCAGAAAGAT GGGGAAAGCT CAATCGCGTA TAAGTACCGC GATTAGTAAC
TTAGAAGCGG GCTTAGGTTT TGAGTTATTT GACCGCAGCG CAAGACTTCC TGTACTCACT
TCACTCGGCG AAGAGATGTT TATTGAGGCG CAATCGGTTC TGGCTCAGTG TCAGCGCCTT
AATGCGCGTG CTATGACCGT CACCTCAGGT GAGGAGATCA CCCTTACCGT GGCTATGGAT
GAAGCGGTAC CGGTTACTGC ATTTGAAGCG TTATTTCAGC GTATATCGAC GCAATTCCCA
TTGCTTAAAC TCACTATCAT TAATGGATCG CAAGAGGATA TTGCCGCTTG GGTGGATGCC
GGGCGCGCCG ATATTGGCAT TATGTTCCAT AGCAACACAT TGCTACCAGA CTCCCTAGAT
TTCATGTCGA TTGGCCAGTT TAAACAGAGC TTAGTGGTCG CGCCATCCCA TCCATTAGCA
TCGACCCCAG CGCCGACTTT AGAGCTGTTG ATGCAATATC GGCAGTTAGC TATTTGCGAC
ATTACCGGGC AATCACAGAC GCCGCCTTTA TCGGCAAATT ATTGGTATAT CGATAGTTAC
TATTACATTG TCGCGCTAGT TTTGCAGGGC GTGGGCTGGG CGTTAGTGCC AGAACACGTG
GCTAAATCTG AGTGGTATAT TGATGACCTT TGTGAGCTTT CCACAGAATA TATTACCGAG
CCTTTGCTGG TGGAGATGGG GGTAGTTAAT CGTCGTGACA AGCAAATCGG CCCGATAATG
CACTGGTTGT TTGATGAGTT ACATTCGGTG TTGCAATGA
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| Protein sequence | MNWTIDELNA FVNSVKLGSF SAAARKMGKA QSRISTAISN LEAGLGFELF DRSARLPVLT
SLGEEMFIEA QSVLAQCQRL NARAMTVTSG EEITLTVAMD EAVPVTAFEA LFQRISTQFP
LLKLTIINGS QEDIAAWVDA GRADIGIMFH SNTLLPDSLD FMSIGQFKQS LVVAPSHPLA
STPAPTLELL MQYRQLAICD ITGQSQTPPL SANYWYIDSY YYIVALVLQG VGWALVPEHV
AKSEWYIDDL CELSTEYITE PLLVEMGVVN RRDKQIGPIM HWLFDELHSV LQ
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