Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_4044 |
Symbol | |
ID | 5664428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4911516 |
End bp | 4912655 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641238708 |
Product | hypothetical protein |
Protein accession | YP_001503889 |
Protein GI | 157963855 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.445653 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTATGA AAACGAGAAA AACTTTCTGC CTGTCTATAA TTACTAGTGC GATCGTATTA AGTAGTTTCC ACACTATCGC TGCCGAACAA GAAGAAGATG GAATTAATAT TCATGGCGGT GTACGAGTCA ACTATGCCTA TAAAGATTAT AGTGAGACTT CAAAAGATAA AGGCGGTGAT TTCACCTTTG ATATGGCGTC ATTACGATTC GACGCAAAAC ATGGTAACTG GGGCTTAAAA TCGGACTACC GCTTTACCGC TAACACTAAC TATATCAAGT TTGGTTATGG CTATTATGAT TTCAACCCTG AGTGGCAGTT ACAATTTGGT ATAAACAAGG TGCCTTTCGG TAACCTAGGA TATATTTCAA ATAGTTATTG GTTTGGTTTG CCTTACTATC TCGGCTTTGA AGACGATCAT GATATTGGTG TAAAGGCGGT ATACGAGCAT AATGGTTGGC AAACTGACAT GGCGTTTTAC AAAGGTGCCG AATATGGCCC AACAGAAAAC AAACGTTATG CAGCCGATCT TTATAGCGGC ACCATCAACG GTACCGAATA TCACAACGAA GAAACTAACC AAGTTAACCT ACGTCAAAGC TACACCATGG AACATCAAGG TGGCTCAACT ACATTCGGCG CCTCTATTGA AGCGGGTCAG ATCTATAACT CTGAAACCGG CAACAATGGC GACAGATACG CATTCGCAGC TCACTTAGAC AGTACGTTTA ACGGTTGGAA CTTACAGTTG CAAGCGATGC AATATGAGTT CAATGCTGCC GACAGTGCAA ACGATAACAA GATTGCTGTA TCAGTTGTTA GCTGGCAGTT TGAGGTTGCA TCCAAGGGGC AGGTTTACAG TGCCAACATC GCCAAAACAA TTCCAACCGA TTGGGGTAAT GTTAAGTTCT ACAACGACTT CGGCTTAATG ACACCTGATG TCGATGACGA TAGCTATGAT AACAGTATGC AAAACGTATT AGGTGCTGCA ATTTCTGCTG GCCCAACCTA CACCCAAATT GATTTTATCA TGGGTAAAAA CATGACTTTC TCAACCGCCA ACAATGACCA TATCGGTCTA CCAGAAGTGG GCGATGACTG GGATAAACGC TTCAACGTCA GTGTTGCTTA TTACTTTTAA
|
Protein sequence | MIMKTRKTFC LSIITSAIVL SSFHTIAAEQ EEDGINIHGG VRVNYAYKDY SETSKDKGGD FTFDMASLRF DAKHGNWGLK SDYRFTANTN YIKFGYGYYD FNPEWQLQFG INKVPFGNLG YISNSYWFGL PYYLGFEDDH DIGVKAVYEH NGWQTDMAFY KGAEYGPTEN KRYAADLYSG TINGTEYHNE ETNQVNLRQS YTMEHQGGST TFGASIEAGQ IYNSETGNNG DRYAFAAHLD STFNGWNLQL QAMQYEFNAA DSANDNKIAV SVVSWQFEVA SKGQVYSANI AKTIPTDWGN VKFYNDFGLM TPDVDDDSYD NSMQNVLGAA ISAGPTYTQI DFIMGKNMTF STANNDHIGL PEVGDDWDKR FNVSVAYYF
|
| |