| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_4020 |
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| Symbol | |
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| ID | 5664404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4884012 |
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| End bp | 4884986 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238684 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503865 |
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| Protein GI | 157963831 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACCA ATGAGAGTGC TAAAGATCTT TCTGTTGCTC ACCTTCAGCT AATCGTCTGT
CTTATCAAGC ATGGAAACGC TTGCGTAGCA TCGGATGAGC TTGGTATGAG TCAATCGACG
ATCAGTTACC ATCTGCGTCG CGTGCGAAGC ATATTTTCTG ATGAGATGTT TGTAAGAACG
GGGAAAGGGC TTAAGCCTAC GGAGCGATGT CTTCAAGTCG GTCATTTTGC TCAAGACTTA
ATTAATCGTG TTGAAGAGGA GTTGATCCAC GGCAATGATT TTGAGGCAAC TCATATTGAG
CGGGAGCTTA GTTTAATTGC TGATGATACT GCCTGTGGTT GGTTTGGGGA GTTATTTGTT
GATCTGCAGA AAGCTTTGCC TAAGGTAAAC CTGTGTGCTC GTCCTTGGTA CCTTAATGCA
CTGAAAGATT TAGACAGTGG CGCCGTACAC TTTGGTCTGC ACATAATGCA AAGCGGCATC
AAAGGAATTT ATGATCTCGA GGTTGTCCCC TGCTATCGTC TATGTGTGGT ACGTGACGGC
CACCCTCTGG TGTCACAAGG AGAGGTAACT CTTGAAGATC TGGCAATGTA TCCGGTAATT
TTAAATGACT TGGCTGGATG GAATAATAAT GGTCACTCAG TTATGGAAAC CGTGCTTAAA
AACCATGGGC TTAAAGCGAA TCTTGTCGGG CGATTAGGCT ATGTGAATAG TATTTTCAGT
GCGTTACAGG GCAGTAATGC GATTACCTAT ACTTCAGCAG TGTCTCTACC TAAGGATCTC
TCTGGATTGA CTTTGCTCAA GGCGCCGCCT GCGCTTGATG AAGTTGAATG TAACTATCGC
CTTTATATTA GTAAGACACG CTATGGTTCG CAGGAAACTA ATTACTTAAT AGAGTTTCTT
TATAATTCTT TTAAGAGTTT TGCGCTGGGT AAGTATGAAA GACCCGAAGT CGCGCCCCTA
ATTAGAAAGT GTTGA
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| Protein sequence | MNTNESAKDL SVAHLQLIVC LIKHGNACVA SDELGMSQST ISYHLRRVRS IFSDEMFVRT
GKGLKPTERC LQVGHFAQDL INRVEEELIH GNDFEATHIE RELSLIADDT ACGWFGELFV
DLQKALPKVN LCARPWYLNA LKDLDSGAVH FGLHIMQSGI KGIYDLEVVP CYRLCVVRDG
HPLVSQGEVT LEDLAMYPVI LNDLAGWNNN GHSVMETVLK NHGLKANLVG RLGYVNSIFS
ALQGSNAITY TSAVSLPKDL SGLTLLKAPP ALDEVECNYR LYISKTRYGS QETNYLIEFL
YNSFKSFALG KYERPEVAPL IRKC
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