| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3970 |
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| Symbol | |
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| ID | 5664354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4823602 |
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| End bp | 4824555 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 641238634 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001503815 |
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| Protein GI | 157963781 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAGG AACTTTCAAA GTTAGATTAT TTCACTCTTA AGGTGTTTAT TGGGTTAGTT
GAGTTTAAAA ATGGCTCGGT TGTGGCACAG AAACTTAACA CTACTCAACC TAAAGTGAGT
CGTGCTCTGA GCAATATGCG TGAAGTGATC CACGATGACT TGTTCATCAG GCGTCAGTAT
GGTGTTGAGC CTAACCTTAT GGCTGACAAG TTGTACCCTA TCGTCAAGTC TATTGTGCAG
GGCTATGAGC AGATGGCTGA AATAACCAGC TATTCGCCAG ATAGTAATCG CTTAGTTATC
GCTGCTCAAG AACACTGGGC TGGATTCTTA GTTGAGTCAA TTACCGAAAT CTGCCAGAGC
TTAGATCGAG ACATATCTGT GATCATTCAA CCTTGGAGTG ATAATGTTCA GGAGTTATTG
GCACAAGGTA AGATTGACTA TGCTATTACC GTTAACTCTA AGCAATCTGA GGCGGTAAAA
AGCGTAAAGG TAGGAGATGT GCGCTACTTC TTTGTGACTG CTAAGAAGAA TCATCCATTC
TTCAAGCAAG AGCTAACGTT GAAAAGTTTA TTGGAGCATA AGCTGGTATT TATCAATTAC
GCTAAAGTGG GCTTGGTGGA ACACTGGCTT GAAAGCTATG CAAAGGAGCA ATGCTTAGAT
ATTAAAGTGA GCTGCAAAAC AACTAGTCTA GCAATGGCGC TTAATCATGT GGCGAAGACC
GATGATATTT GTTGGACTGC GTCTATTCTT TCTTACCTCT ATTTTAATAG TCGCAGTGAT
ATCGATTATA TTGATGTAAC CGATTTTTAT GAAGAACTAC GATTTAAAAA TGGAACTGTT
GAAAGATATA GTTATTACTT ACAGTATCAT CAATCTCGTG ATAATGATTT TTCAACGGCG
CTTTCTAAGT TGTTACAAAA AAAGTTGGAA CTTGCTCAAG AGCTGTATGA ATAG
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| Protein sequence | MRKELSKLDY FTLKVFIGLV EFKNGSVVAQ KLNTTQPKVS RALSNMREVI HDDLFIRRQY
GVEPNLMADK LYPIVKSIVQ GYEQMAEITS YSPDSNRLVI AAQEHWAGFL VESITEICQS
LDRDISVIIQ PWSDNVQELL AQGKIDYAIT VNSKQSEAVK SVKVGDVRYF FVTAKKNHPF
FKQELTLKSL LEHKLVFINY AKVGLVEHWL ESYAKEQCLD IKVSCKTTSL AMALNHVAKT
DDICWTASIL SYLYFNSRSD IDYIDVTDFY EELRFKNGTV ERYSYYLQYH QSRDNDFSTA
LSKLLQKKLE LAQELYE
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