Gene Spea_3955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3955 
Symbol 
ID5664339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4809422 
End bp4810438 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content41% 
IMG OID641238619 
Producthypothetical protein 
Protein accessionYP_001503800 
Protein GI157963766 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACA AAACACTTTC GGTGGCTATA TTATCCAGCC TCATTGCCTG TAACGCTCTC 
GCAAACGATA TTCCAACTCA AACAAATAGC AGCTATCAAC ACGAATTAAA TCTTGCCCTC
GGTACCTATA GTGATGATTT TGGCGATGGT ATATGGGACT TAGGTTATCG CTACTATTTT
TCCCCAGTTG ATATAACTAA AACCCCCTAC GCCCTGAATG GAATCCTTGC ACAAGCTTCA
AATATCGGCG TTCAATACGC TCAAATGCAA ATAATTGATG ACGCAGACCT CTATCAAATA
GATGCTACAT ATGTATTTGA TTCAAAATGG TTTGTAAAAG GGATGTATGA GAAGGATGAC
AGTGACAGTC AATACACAAC TCTAGATGAA AGCCAAGATA GCTATCATTT TAGCTTAGGC
TACTATTTTA ACGACACCTC AGAAGTTTCT ATTTACTATG GAAACGCTAG GAGTTCAGAT
AATTATCATC ATACAATTGA CCTTAATGCA TCAGAGGTCG GCTTCAGATA TCAAGGTGAT
TTTGATTCCC AGACAGATAC ATATGGGGTA CAGGCCCGTA GCTTTATGCC GATGCAATCA
TTTGCAGGCA TAGAACTAGC AGGGTTTTGG CAATATAGTC AAAATGATCA TCGTAATGCC
ACCAGCTATT ACGATGGCAA TTCAGAAGAG TCGGGAAGCT ATCAATATGA CTCAAATACA
GATCGTCATT TAGTTCACCT TGCTACTGAC TTTTATATTA ACAAATCATG GTCAGTGGGC
GGTGAATATT CATGGCAAAA TTTTGACCGC AAAACTATAT TTAATCACAG TCAACAAAGC
GGCCCTTCTC GATATAGCGA TGATGGTAGC GACAGCCTTT ACGCCATCAA TACCGCCTAT
TGGTGGCAAT TCTCAAATCT TTTCACAGCC AACGCTTCTG TAGCTAAATA CTTCGATGAC
GAAGGTGACT CGCCTGATGG AGTTTTCTTC CGTCTGGCCA TTAACGCCCG TTTCTAA
 
Protein sequence
MNNKTLSVAI LSSLIACNAL ANDIPTQTNS SYQHELNLAL GTYSDDFGDG IWDLGYRYYF 
SPVDITKTPY ALNGILAQAS NIGVQYAQMQ IIDDADLYQI DATYVFDSKW FVKGMYEKDD
SDSQYTTLDE SQDSYHFSLG YYFNDTSEVS IYYGNARSSD NYHHTIDLNA SEVGFRYQGD
FDSQTDTYGV QARSFMPMQS FAGIELAGFW QYSQNDHRNA TSYYDGNSEE SGSYQYDSNT
DRHLVHLATD FYINKSWSVG GEYSWQNFDR KTIFNHSQQS GPSRYSDDGS DSLYAINTAY
WWQFSNLFTA NASVAKYFDD EGDSPDGVFF RLAINARF