| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3933 |
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| Symbol | |
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| ID | 5664317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4781386 |
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| End bp | 4782069 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641238597 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_001503778 |
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| Protein GI | 157963744 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000956729 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCCGTA TATTATTGGT AGATGATGAC TTAGGTCTAT CTGAGTTGCT TGCACAACTG
CTGGAACTTG AAGGTTTCAA ACTGACACTC GCCCATGATG GTCAGTCGGG ACTCGATCTT
GCTATTGAGC AACAATTCGA TCTCATTTTA CTCGATGTTA TGCTGCCAAA GCTCAATGGC
TTCGAGGTGT TACGCGCACT TCGCAGTAAA AAGCAGACTC CAGTATTGAT GCTCACCGCC
CGCGGTGATG AAATCGATCG CGTTGTCGGC TTAGAGATTG GCGCCGACGA TTACCTGCCT
AAACCGTTTA ACGACAGAGA ACTCGTGGCG CGTATTCGAG CCATTATCCG CCGCACTCAT
ATACAACCGA GTGAAGCCCC TCAGGCTATA CACCAGTATG GTGACATCCA TTTAGATCCC
GCTCGTCAGG AAGTGCACTG CCAAGATCAG CTCATCATAC TCACAGGAAC CGAATTCAGT
CTGCTGTTTG AACTGGTTAA AAATGCCGGC GAGCTCGCGA GTAAAGAGGC CCTAAGCGAA
AAGGTGCTAG GCAAAAAATT AATGCCTTTC GACCGCAGCT TAGACATGCA CCTTTCTAAC
CTGCGTAAGA AGATGCCAGA GCGTGATGAT GGCCGCCCTC GAGTGAAAAC TATTCGTGGT
AAAGGCTACA TTTGGTTACC TTAA
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| Protein sequence | MSRILLVDDD LGLSELLAQL LELEGFKLTL AHDGQSGLDL AIEQQFDLIL LDVMLPKLNG
FEVLRALRSK KQTPVLMLTA RGDEIDRVVG LEIGADDYLP KPFNDRELVA RIRAIIRRTH
IQPSEAPQAI HQYGDIHLDP ARQEVHCQDQ LIILTGTEFS LLFELVKNAG ELASKEALSE
KVLGKKLMPF DRSLDMHLSN LRKKMPERDD GRPRVKTIRG KGYIWLP
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