Gene Spea_3896 details

Gene Information

• Locus tag: Spea_3896
• ID: 5664280
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 4742226
• End bp: 4742972
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641238560
• Product: outer membrane lipoprotein carrier protein LolA
• Protein accession: YP_001503741
• Protein GI: 157963707

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTGTT TATTAAGCCT AGCCCTTAGC CTCATGTTGC TGTGTAGCCC TAGCTATGCT 
GATTCGGACT ACAGCGAACT GTTCAGCCAA CATGCTAACA GTGCAGAACT AGCAAAGCTT 
AGCCAACAGC TATCACCTAG TGAGCAGGCA AAGGGGAAGT TTACTCAGAG CCGTTACCTT 
AAGGTACTGA AAAAGCCTTT GCTCAGTCAG GGCGAATTTA TCTTTGCTAA AGATCTTGGG 
GTGATTTGGC AACAAAATAG CCCCTTCGCC AGCACGCTGA TCCTAAAAGA TAAGCAACTG 
ATACAGATAG ATAGTCAAGG CAATATTAGC GTCAATGATG CCGAGCAAGC AGGCAGCGGC 
AGTCAAATGA GTGAGGTGAT GCCAAAACTG TTAAACGCCC TGTTAAGCGG TGATATTCAA 
CAGCTAGAGC AGCATTTCAA CCTCAGCCTA GTGCAAGCTC AAACTGGGGC AGGCGTTAAT 
CACTGGCAAT TAGGATTAAA ACCAATAGAT CCTATGATCG CCAAGGCCCT ACCTAAATTA 
GTGCTAGTCG GCGATGCGAA GATACAAAGC TTGGTTCTGT TCAGCGCCAA CGGCGATCGC 
AGTGAAATTG CATTTTCAAC CATAGATGAA CGTCCACTCA GCTCAAGCGA TAAGGCACGT 
TTTAGCCCTT CAAAACCGCT TGAACCAGAC GCGGCAGTGA CTCCAGTAAA TATAGACGCT 
CAGCTCAGTG AGAGTAAACA GCCATAA 

 

Protein sequence

MKCLLSLALS LMLLCSPSYA DSDYSELFSQ HANSAELAKL SQQLSPSEQA KGKFTQSRYL 
KVLKKPLLSQ GEFIFAKDLG VIWQQNSPFA STLILKDKQL IQIDSQGNIS VNDAEQAGSG 
SQMSEVMPKL LNALLSGDIQ QLEQHFNLSL VQAQTGAGVN HWQLGLKPID PMIAKALPKL 
VLVGDAKIQS LVLFSANGDR SEIAFSTIDE RPLSSSDKAR FSPSKPLEPD AAVTPVNIDA 
QLSESKQP