| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3867 |
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| Symbol | |
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| ID | 5664251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4700246 |
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| End bp | 4701979 |
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| Gene Length | 1734 bp |
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| Protein Length | 577 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641238531 |
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| Product | OPT family oligopeptide transporter |
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| Protein accession | YP_001503712 |
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| Protein GI | 157963678 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1297] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00728] oligopeptide transporters, OPT superfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCCA ATACACCTCA AATTAGCTCT CCTCCATTAT CTATACGCGC GATAGTTACA
GGCATGATCC TAGGCAGCAT TCTGGTTCTG TGTAATCTAT ACATGGGGCT GCGTATTGGC
TGGTCAATCA ATATGTCGGT ACTGGCATCC TTGCTCGGTT TTATTGCTTG GAAGGGGATC
GGTGCGACTA TCCCTTGCCG TGCTTGGAGC CCCCGTGAAG CAAACATACA GCAAACGGCG
GCCTCTGCCG CGGGAGGCAC ATTATCGGCA GGACTCGTAT CCGCCATCCC CGCCTATATG
ATCCTCAGTG AGTCTGAGTT TGATTATTGG CCGATGGTGA TTTGGATGAT AAGCATTAGC
CTACTTGGGA TCTGTGTCGC TTCAGCCATC AGACCCGCCA TGTTACATAA TGAGCGTTTA
CGTTTTCCCG CCGGGATAGC GACTGCTGAG GTCATTAATG ATATGTTTAG TGGCGCACGC
ATTGCCCGCC ATAAAACACT GGCATTACTA TCGGCCATGG CCGTGACCAT AGCACATCGC
ATCTTTATCC CTGTCAGCTA CAAAATACCA CTGGGGTTTT CCATACCAGG CCAGGGAGCG
GTAGCTGGAA GCAGTATTAG CGCAAAAAAC TTAGGCTTTA TCATCGATCC CTCATACATG
CTACTCGCTT TTGGCGCCAT TATTGGAACC AAGTCGGCAT TAAGCCTATT TGCAGGTGCA
CTCATCGCTT GGTTAGGACT AGGCCCCTAT ATTGTGGGAC AAGGCTGGGA ACAAGCAGGG
CCTGCAGATG GTCATTGGTT CAGTTACTTA ATTGACTGGC TCGTTTGGCC CGGCGTAGCA
ATGATGCTCG CGTCCGCCGT TACCACTACC GCGATCTCAT TATTTAAGTC ACAGAAGAAA
GCTAGAATTA CCTTGATGTG GGGCTGGCAG GAGTATTTAC TACTGTCAGT ATTAACCCCG
ATCCTCATAG GTTTGCAAGT TTATCTATTC GATATTAGCT GGTTTGCGGC AATGCTGGCC
GTGCCTTTAG CGTTTATATT TGCAATCGTT GCAGCGCAAG TTGTAGGTGA AACTGGCATC
CCGCCTATCG GCGCATTAGG TAAGTTATCA CAACTGAGTT TTTCGGTGAT CAGCCCAGGA
AATCTAACCA CTAACTTGAT GACTGCTAAT GTCGCCAGTG GCGCTGCGGG TCAAGCGACA
GATCTTCTCA ACGACTTTAA GGCGGGTCAG TTACTTGGTA CAAACCCTCG CCATCAAATG
TTTGCTCAAG CAATGGGAAT TTTGGTTGGT TGTGTAACCA GCGCTGGGGT TTTCATGCTG
TTAATTCCCA ACCCTGCAGA ACAGCTAATG ACAGAGCAGT GGCCAGCGCC AGGCGTTGCA
GCTTGGACAG CCATAGCCCA GGCATTGACT CAAGGGTTAG AGGCCATCCC TCAGTCGGCA
CGATATGCGA TGTTTATCGG CATCGTGGTC GCGACGCTCA ATGAACTTAT GCTATTGGTA
GTCAAACCCA AATGGCATCC TTACCTGCCA AGTATGTCAG CCATGGGATT GGCATTCGTA
CTGCCTGCTC AAGTCAGCAT TATGTTGTGC ATTGGTGCTT TACTGGCTTG GGTATTAAGA
CAACTGGCTC CTCGCTGGTC AAAACGATTC TTAATCGCCC TAGCGGCAGG CTGCATAGCC
GGAGAGAGTA TCGCCGGCGT ATTAGGTTCA CTGCTATTTA TGATTAAGCC CTAA
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| Protein sequence | MMPNTPQISS PPLSIRAIVT GMILGSILVL CNLYMGLRIG WSINMSVLAS LLGFIAWKGI
GATIPCRAWS PREANIQQTA ASAAGGTLSA GLVSAIPAYM ILSESEFDYW PMVIWMISIS
LLGICVASAI RPAMLHNERL RFPAGIATAE VINDMFSGAR IARHKTLALL SAMAVTIAHR
IFIPVSYKIP LGFSIPGQGA VAGSSISAKN LGFIIDPSYM LLAFGAIIGT KSALSLFAGA
LIAWLGLGPY IVGQGWEQAG PADGHWFSYL IDWLVWPGVA MMLASAVTTT AISLFKSQKK
ARITLMWGWQ EYLLLSVLTP ILIGLQVYLF DISWFAAMLA VPLAFIFAIV AAQVVGETGI
PPIGALGKLS QLSFSVISPG NLTTNLMTAN VASGAAGQAT DLLNDFKAGQ LLGTNPRHQM
FAQAMGILVG CVTSAGVFML LIPNPAEQLM TEQWPAPGVA AWTAIAQALT QGLEAIPQSA
RYAMFIGIVV ATLNELMLLV VKPKWHPYLP SMSAMGLAFV LPAQVSIMLC IGALLAWVLR
QLAPRWSKRF LIALAAGCIA GESIAGVLGS LLFMIKP
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