| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3860 |
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| Symbol | |
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| ID | 5664244 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4691291 |
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| End bp | 4693012 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238524 |
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| Product | hypothetical protein |
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| Protein accession | YP_001503705 |
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| Protein GI | 157963671 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00093801 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGGCTA AACTCACTTT AGTAGCACTC GCTGTTCTCT CAGCCAACGC TACCGCAGCA
AACTTCGCTG TGCCGCAACA CATTGAAACA GACTATGCCT GTCAGCGTTG TGCTGCACCA
GAGCACAACA ACACTGCTGG CGTGATGACC GAGCAAAGTA CTCACTTAGA TAGTCAGTAT
GGTGCTAACG CCGATATCCA AAACAAGCAC TACAGCGTAG ATGCTAACAA TGCGGGAGCT
GATAATGGTC ACTTAAAAGC AGCTGCTTAC TATGGCGACT TTGCCTTGGA GCTGGCTTAT
GTTGACCGCT GGAACCTAGA TGACAACGAT ATCGGCGCCG AGCGTAAGCA GTTATCTGCT
GCTGCTAAGT ATCAAACTCA GCTGGTTAGC GCGTTTGTTA AAGCAAGCTC GGAAGACAAA
CAGGGCCAGC GCATTTCATC AACAATGAAA GCTGGAGGGG TCAAAACAAC TAACTATTTA
GAAGCTATCG ACCACACCAC TCAGGTGATG AACGCAGGCG TGCAGTTGCA CGGTGATTTT
TGGAACCTAG GCGTTGCCGC CTTTAACTCT GACTTTACTG ACAATGCTGG TATCGATGCC
GATAACAGTG CCCAACAAGC TAGCGTCAAA GGGGCCCTTA ATGTTGGCAG CACTCGCCTT
AGTCTAAGTG CTGCCTCCGG CAAGATGATT CAGGATGATG CGATTGAGCA AGATAACTCG
CTGGTACCTA TCTCTAACTT CGATGGTGAA GTGGAAACCC TCGACTATAA CGCCCGTATC
AGCTCGCGCT TTGTTGGTAT TAAGCTCAGC GGCTTTTATC GCTACAGTGA CCGCGATAAT
GTCAGTGGCT CATATGAGTT TTTCGATGGC AATCAGCCAC CCGTTATTAA CACTCCAATC
GACACCAGCA AGACCCAGTA TGGCGTCGAT GCCAGCTACC GTTTAGGCAG TGCTAAGTTC
AGTGCAGGTT TTGAGCAAAA CGACCGCACT CGCAGCGATA GTGACCGTGA AGAGACCCAA
GAGAGTGAGC TGTTTGCACG CGTAGACTAC CGCTTAGGCG CGCTTAATTC GCACGTTAAG
CTCACCAACG GTGCACGCAC TGGCTCTGAC TACCGTATTG GCGAGGATAT TTTTGAAAAG
TACTACTTAG CCGACAGAGA CCGCCTCAGC ACTGAGCTTG GTCTGGGCTA TAGCCACAAT
AACTATGGCG CAAACCTCAA AGTTATTTTA GCCAGCGATG ACTACGCAAA CAGCTCGGCA
CTGCAAGAAT CTGATGAAGT GCTCGTTAAC TTCGACGGCT TCTACCGCTT CAGTGAGCAG
TTAGTGCTGA GCGCCTACGC GGGTACTCAG ACCATCGACA GCTTAGAGCT ACACAACACC
AGTATCAGTG ATGAGTTTAG CTATTTTGGT TTTGGTCTAG AGCAGTACCA AATTAACGAC
GATATCTCAG TCGGCAGCTC CTACACCTTC TCATTTTCTG GCAGTGACAC CTCGGTCGAT
AGCACCGAGA TGGGTGACTA CTACCAGTAC CAACACCTTG CTGAAGTCCA TATGGATTAC
CGCATCAATG CGCGTTTCTC GACTCGTTTG GCTTACACCT ACGAGCGCCA CTACGACACG
AATTACGCCA ATCAACCGAT TGAGAGCATC AACTCCATTG CTGACCTCAA TCAGAATTAC
ACCGACCACA AGATCGGTGT ATTTTTCACA ATCAAGCTTT GA
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| Protein sequence | MKAKLTLVAL AVLSANATAA NFAVPQHIET DYACQRCAAP EHNNTAGVMT EQSTHLDSQY
GANADIQNKH YSVDANNAGA DNGHLKAAAY YGDFALELAY VDRWNLDDND IGAERKQLSA
AAKYQTQLVS AFVKASSEDK QGQRISSTMK AGGVKTTNYL EAIDHTTQVM NAGVQLHGDF
WNLGVAAFNS DFTDNAGIDA DNSAQQASVK GALNVGSTRL SLSAASGKMI QDDAIEQDNS
LVPISNFDGE VETLDYNARI SSRFVGIKLS GFYRYSDRDN VSGSYEFFDG NQPPVINTPI
DTSKTQYGVD ASYRLGSAKF SAGFEQNDRT RSDSDREETQ ESELFARVDY RLGALNSHVK
LTNGARTGSD YRIGEDIFEK YYLADRDRLS TELGLGYSHN NYGANLKVIL ASDDYANSSA
LQESDEVLVN FDGFYRFSEQ LVLSAYAGTQ TIDSLELHNT SISDEFSYFG FGLEQYQIND
DISVGSSYTF SFSGSDTSVD STEMGDYYQY QHLAEVHMDY RINARFSTRL AYTYERHYDT
NYANQPIESI NSIADLNQNY TDHKIGVFFT IKL
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