| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3846 |
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| Symbol | |
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| ID | 5664230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4673505 |
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| End bp | 4674824 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641238510 |
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| Product | HipA domain-containing protein |
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| Protein accession | YP_001503691 |
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| Protein GI | 157963657 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTC TGGATGTTTA TATGAATGGC TATTTGGTCG GTGAGTTTAC TAAATCGACC
ACAGGCTCTC ATCTGTTTAA GTATGCAGCC CAATGGCTAG ATACGCCTGG CAGTCGTCCT
ATTTCACTGT CTATGCCATT GCGTTCGCAA GCGTATAAAG GCGATGAGGT TTATAACTTC
TTTGATAATT TACTGCCAGA TAACATGGAG GTGAGAAACA GGATTGTTGC TCGTCACAAT
GCGCAATCGA CACAAGCGTT CGATCTACTC GCTAAAGTCG GTCAAGACAG TGTTGGTGCA
CTGCAGTTAG TACCCCATGA GCAGCAACCC TTTGAGGTTA AAAAGATTGA AGCTAAACCT
TTATCTGATG AGGCATTGGA AAAAGTGCTC AAAGGTTATC AGTCAGATAT TCCATTAGGC
ATGCTAAGCG ATGAAGATGA TTTTCGAATA TCGATTGCAG GTGCCCAAGA GAAGACCGCC
TTACTTAATT TAGATGGCCG ATGGCAGCTT CCAATTAAAG CTACACCGAC TACACATATC
ATTAAGTTGC CTATCGGTGA GATACAGAGT CATTCATACA CTATTGATAT GTCTGACAGC
GTTGAAAACG AATATCTGTG TATGATGATA GTAAGGGAGT TTGGCTTAGA TGTACCAGAT
TGCTCAATAA TTAAAGTTGG TGATAATAAG GCGCTGGCAG TAGCACGTTT TGATCGTAAA
TTATCTAGCG ATGGCCAATG GATTATGCGA TTGCCACAAG AGGATTTCTG CCAAACATTA
AATATTCCAT CGGCTAAAAA ATATGAAAGT CACGGCGGGC CGGGTGTTGA GCATATCATA
CCTTATTTAC TGGGCTCTAT GAACTCAGAG CAAGATAGGT ATAACTTTAT GAAGTCGCAA
GTGCTGTTCT GGCTTTTAGC GGCAACAGAC GGCCATGCTA AAAACTTCTC GCTATTTATT
GAGGTTGGCG GCGGGTATCG ATTAACTCCC TTTTACGACA TTATATCCAT GTATCCAGTA
ATTGGTGGCA AGGGCCTAAA TATCCGTGAT GCCAAGCTTG CTATGGGGCT CAAAGCTACC
AAAGGTAAGA AGTATCAGAT AGTAAAGATT TTCCCTAAAC ACTTTATCGA AACTGCGAAA
GCGGTTGGCT TTGATCTCGC TACTATGGCA GCCATTTTGC GAGAGGTTGC TGATTCAGTA
GATAACGTGA TTATGAAGGT TAAGACTCAG TTGCCCGAAG ACTTTCCTGT ACATATACGA
GATTCGATTT TGGATGGTTT GCAGGATAGA GCAAAGCGCC TGATGGCGGG GGCGTACTGA
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| Protein sequence | MAVLDVYMNG YLVGEFTKST TGSHLFKYAA QWLDTPGSRP ISLSMPLRSQ AYKGDEVYNF
FDNLLPDNME VRNRIVARHN AQSTQAFDLL AKVGQDSVGA LQLVPHEQQP FEVKKIEAKP
LSDEALEKVL KGYQSDIPLG MLSDEDDFRI SIAGAQEKTA LLNLDGRWQL PIKATPTTHI
IKLPIGEIQS HSYTIDMSDS VENEYLCMMI VREFGLDVPD CSIIKVGDNK ALAVARFDRK
LSSDGQWIMR LPQEDFCQTL NIPSAKKYES HGGPGVEHII PYLLGSMNSE QDRYNFMKSQ
VLFWLLAATD GHAKNFSLFI EVGGGYRLTP FYDIISMYPV IGGKGLNIRD AKLAMGLKAT
KGKKYQIVKI FPKHFIETAK AVGFDLATMA AILREVADSV DNVIMKVKTQ LPEDFPVHIR
DSILDGLQDR AKRLMAGAY
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