Gene Spea_3772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3772 
Symbol 
ID5664157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4585184 
End bp4586065 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content44% 
IMG OID641238432 
Productbiogenesis protein MshI 
Protein accessionYP_001503618 
Protein GI157963584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAAA GCCTGTTGGA TAATATTCAG TTTTGGCGCA AATCCGTACC GACACTCGAG 
TTGGGCATTT ATATATGCGC AGAAAGAATA TCTGTCTTTC AAGGGCCTGT AGCTGAAATT
GGCGCTAAAG CTATGGCATT CTCATTTAAG CATCACGACT GGGATAGTGC ATTCTCACAA
GTGGCTAAAG AGTTTGGTTT AGCAAAAATT CAAATTGTAT TAGCCTCCGA TTTCTATCAA
CTTTTACTGG TCGATAAGCC AAATGTACAA GCCGAAGAGC TTAACGCCGC GTTGCTTTGG
TCTGTGAAAG ATATTGTGAC TCAGCCTGTT ACAAATATTC ATTTGGATTA CTTCGAATCA
TCAAAACAGA CCAGCAATAA AGTGAATGTG GTTGTCACTG AAAAGTCGTT ATTAACCGCT
TTGTTGTTGG CCGCTAAAAG CGCAGGTTTT CAAACTGTGG GAGTGTCAAT TGAAGAGATG
GCGATGAGCA ACCTGTTCAA TGACAATCAA GCCCGACTGG TATTAAGCCA TCGTGAAGGA
CAAGAGTTAC TGCTGACGGT TGTTCGAGCC GGTGAAGTTT TTATGCAGCG TCGAGTTCGA
GGCTTTCAAC AGCTTGATAA AATCTCCTCG GAAGACTTAG CCTATGGCGT CGCCGATAAT
TTAAGTTTAG AGCTCCAGCG TTCTATGGAT TACTTTGAGA GTCAGCTTCG TGAGGCTCCT
GTTTCATCAA TTGAGCTTGT CATCGATGGT GAATGTGAGC AGCTTGCGAA CCTAATTAGC
GCCAATTTTA ATCAAGCCGT CACTCCCCAT AAAGGTGCTT CCGTTGACGC AACATTTGCT
GAGCTGGCCT TAGCTGAAAC TATGCGAGGT CAATCGCAAT GA
 
Protein sequence
MKQSLLDNIQ FWRKSVPTLE LGIYICAERI SVFQGPVAEI GAKAMAFSFK HHDWDSAFSQ 
VAKEFGLAKI QIVLASDFYQ LLLVDKPNVQ AEELNAALLW SVKDIVTQPV TNIHLDYFES
SKQTSNKVNV VVTEKSLLTA LLLAAKSAGF QTVGVSIEEM AMSNLFNDNQ ARLVLSHREG
QELLLTVVRA GEVFMQRRVR GFQQLDKISS EDLAYGVADN LSLELQRSMD YFESQLREAP
VSSIELVIDG ECEQLANLIS ANFNQAVTPH KGASVDATFA ELALAETMRG QSQ