| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3766 |
|---|
| Symbol | |
|---|
| ID | 5664151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 4579741 |
|---|
| End bp | 4581027 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641238426 |
|---|
| Product | TPR repeat-containing protein |
|---|
| Protein accession | YP_001503612 |
|---|
| Protein GI | 157963578 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTAA TCAACAAGAT GCTCAAAGAT TTAGATGAGC GCCAACAGCC TCATGGTATC
GAGAGTATGG CCGCGCCGCA GTTGGCTTTT AAGCCTAAGT CGTCATCGAA ACGAACCTTA
TTGTTGACCA GTATTGTTTC TCTCGCCATC GGTGGCTTTG CTATGTTTTT TGGTTTAAGC
CTGATGCATC CGCAAACGAC TAACGCGGAA ACTGCTAGAG CGAAAACAGC TAAGATGGAA
ACTGCTAGGG CAAAAATAGC CGAGACGGAA ACAGCTGAGA CCAAAGCTGT TAATGCAACA
GTAGCTGAGA CGGAAACAGT TAAGGCGGAA ATAACTGAGG CGGAAACAGT TAAAGTGGAA
ACAGTTAAGG CGGAAACAGT TAAGGCGGAA ACAGTTAAGG CGGAAACAGC TAAGGCGGAA
ACAGTTAAGG CGGAAACAGT TAAGGCGGAA ATAGTTAAAG CGGAAATAGT TAAAGCGGAA
ATAGCTGAGG CGGAAATAGT TAAAGCGGAA ATAGCTGAGG CGGAAACAGC TAAGTCGAAA
AAAGCTGAGA CGGAAGTCGC TAAGGCAAAA ACAGCAAAGA CCGAAGCAGT TAATGTGACA
GTAGCTGAGA CGGAAAAGCC AGTGCCTGCT CAGTTAAATA TTGCGCCTGC GAGCCGTTCT
CGCCAGCTGC ATAGCAGCGG CAATATGGCG GTGAGAGAAG TTAAGCTTTC ACCTGAACAG
CTAGCTCAGA AGCAAATGCT TTTGGCTACC GATGCTCAGC AGCAGGGGCT GCATAGTGAT
GCGTTAACCT ATTACGAAGC AGCGCTTATG TATAACCCAG CACTGCACCA AGCGAGACGG
CAAGTTGCGG CGCTGTATTA TGGTCAGAAT AAATTAGCTA AGGCCGCCAA AATTCTCGAA
CAGGGGCAGT TACTCTTCCC GCAAGAATAT GAGTTTTCAT TGCTCTTAGC ACGAGTTCAG
CAGGCGGGTG GGCAAAGTGA GTTGGCATTA AAGAGCCTAG CTATGATCCC CGACAGTAGT
GATTTGGCGT TGAAAAAGTG GCATCAGCAG AGTGATTTAG CGCAGAAGCA AAAAGACTTT
CCAACTGCCG AGCAGAGCTT TCGTCAACTT GCCAAGCATG AACCGAATCA AGGTCGATGG
TGGATGGGAC TGGCTTACGC GTTAGATGCT CAGCAGAAAT ATACCGAAGC GAAATCAGCC
TATAACCAAG CTTTATCCCA AGGTAACTTA TCGGTACAGG CTAAAGTTTA CGTCGATAAT
CGATTGCTGC AGTTAGGAGC ATACTAG
|
|---|
| Protein sequence | MSVINKMLKD LDERQQPHGI ESMAAPQLAF KPKSSSKRTL LLTSIVSLAI GGFAMFFGLS
LMHPQTTNAE TARAKTAKME TARAKIAETE TAETKAVNAT VAETETVKAE ITEAETVKVE
TVKAETVKAE TVKAETAKAE TVKAETVKAE IVKAEIVKAE IAEAEIVKAE IAEAETAKSK
KAETEVAKAK TAKTEAVNVT VAETEKPVPA QLNIAPASRS RQLHSSGNMA VREVKLSPEQ
LAQKQMLLAT DAQQQGLHSD ALTYYEAALM YNPALHQARR QVAALYYGQN KLAKAAKILE
QGQLLFPQEY EFSLLLARVQ QAGGQSELAL KSLAMIPDSS DLALKKWHQQ SDLAQKQKDF
PTAEQSFRQL AKHEPNQGRW WMGLAYALDA QQKYTEAKSA YNQALSQGNL SVQAKVYVDN
RLLQLGAY
|
|---|
| |