Gene Spea_3686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3686 
Symbol 
ID5664071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4485983 
End bp4487062 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content35% 
IMG OID641238346 
Producthypothetical protein 
Protein accessionYP_001503532 
Protein GI157963498 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGAAAA AAATACAGTT TTTTCATAAA ACAAGAGCAA GAGTTATACA ACGAAAAGCC 
CTAAAAAAGG CTCAACGAAA AACTAGAAGT AAGCAGACTT CTAGTACTGG TCGCCCAAAA
AAACTCGGCG CAGCTGAAAT AATTTATGCA CCTCTCGAGT TTTCTATATA TGAGCTAGCT
GAAGGTGACA CTCAAAAATA CAGCGAAGCC ATTGATTTTA TTGAAAAAAT AAAATCAATT
GACCATTCTA AATCCTATAT TATTGATTTT TCCAATACTG AACGTGTTAC AGCGGCAGCT
TTGCTACTTC TTTATGCTAC GATAGATCAA AAGAAAGTTA CTGGGCCAGT AAACTCCTCA
ATCGTATGGC CACATAGCGA TTCAGCAAGA AGGGTTATAG TAAAATCAGG GTTAAATAAG
TTATTGCAAA ACACTCTAAA TACAGAGGAA CCTGACTTTT CAAATACTAT TATTAGTGGT
GTTGGTAATG ATAAAGTTGA AAGTCTCATC GATCATATAG AGCAATCTGT ATACAAAAAT
CAAATGGATG ACGAGGTTGA ATACCTATAT GGTGATGCAA TATCTGAAAC AATTAATAAT
GTAGGAAGAC ATGCTTATCC CGAATCAAAT GCATCTGATA AAAAATGGTG GATTCTTTGT
GATGTAATAG GTGATAAACT ATTTGTACTT ATTTATGACT GTGGAATTGG TATCCCTAAA
ACGGTTGTCA AAAGAAACTG GTTTATTAGT TCTGTAGAAA AATTTTATCC TGAGCAATAT
GCCGAAGCCA AACAGGCTCC TGCGAGTCAA AGCAAATTGT ATTTTTTTGG CTCTTTAAAG
GACGAAAATC TTATTGATCT TGCGATGAAG CAAGATGTAA CAGGAACTCT CAAAAGTAAA
CACGGTCAAG GAAGTAAGAG CATTAAAGCT CTAGTCAGCG AAACTCATAG AGGAAAGTTG
TGGATTTACA GCAATAAAGG GCTTTTAACT TTTAAGAATG TTGACACCCC GGTAGACTTG
CACACCCTCA ACAAAGGATT TCCTGGAACT TTAGTACAGT GGAACATTAA AATATCATGA
 
Protein sequence
MKKKIQFFHK TRARVIQRKA LKKAQRKTRS KQTSSTGRPK KLGAAEIIYA PLEFSIYELA 
EGDTQKYSEA IDFIEKIKSI DHSKSYIIDF SNTERVTAAA LLLLYATIDQ KKVTGPVNSS
IVWPHSDSAR RVIVKSGLNK LLQNTLNTEE PDFSNTIISG VGNDKVESLI DHIEQSVYKN
QMDDEVEYLY GDAISETINN VGRHAYPESN ASDKKWWILC DVIGDKLFVL IYDCGIGIPK
TVVKRNWFIS SVEKFYPEQY AEAKQAPASQ SKLYFFGSLK DENLIDLAMK QDVTGTLKSK
HGQGSKSIKA LVSETHRGKL WIYSNKGLLT FKNVDTPVDL HTLNKGFPGT LVQWNIKIS