Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3686 |
Symbol | |
ID | 5664071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4485983 |
End bp | 4487062 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641238346 |
Product | hypothetical protein |
Protein accession | YP_001503532 |
Protein GI | 157963498 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAGAAAA AAATACAGTT TTTTCATAAA ACAAGAGCAA GAGTTATACA ACGAAAAGCC CTAAAAAAGG CTCAACGAAA AACTAGAAGT AAGCAGACTT CTAGTACTGG TCGCCCAAAA AAACTCGGCG CAGCTGAAAT AATTTATGCA CCTCTCGAGT TTTCTATATA TGAGCTAGCT GAAGGTGACA CTCAAAAATA CAGCGAAGCC ATTGATTTTA TTGAAAAAAT AAAATCAATT GACCATTCTA AATCCTATAT TATTGATTTT TCCAATACTG AACGTGTTAC AGCGGCAGCT TTGCTACTTC TTTATGCTAC GATAGATCAA AAGAAAGTTA CTGGGCCAGT AAACTCCTCA ATCGTATGGC CACATAGCGA TTCAGCAAGA AGGGTTATAG TAAAATCAGG GTTAAATAAG TTATTGCAAA ACACTCTAAA TACAGAGGAA CCTGACTTTT CAAATACTAT TATTAGTGGT GTTGGTAATG ATAAAGTTGA AAGTCTCATC GATCATATAG AGCAATCTGT ATACAAAAAT CAAATGGATG ACGAGGTTGA ATACCTATAT GGTGATGCAA TATCTGAAAC AATTAATAAT GTAGGAAGAC ATGCTTATCC CGAATCAAAT GCATCTGATA AAAAATGGTG GATTCTTTGT GATGTAATAG GTGATAAACT ATTTGTACTT ATTTATGACT GTGGAATTGG TATCCCTAAA ACGGTTGTCA AAAGAAACTG GTTTATTAGT TCTGTAGAAA AATTTTATCC TGAGCAATAT GCCGAAGCCA AACAGGCTCC TGCGAGTCAA AGCAAATTGT ATTTTTTTGG CTCTTTAAAG GACGAAAATC TTATTGATCT TGCGATGAAG CAAGATGTAA CAGGAACTCT CAAAAGTAAA CACGGTCAAG GAAGTAAGAG CATTAAAGCT CTAGTCAGCG AAACTCATAG AGGAAAGTTG TGGATTTACA GCAATAAAGG GCTTTTAACT TTTAAGAATG TTGACACCCC GGTAGACTTG CACACCCTCA ACAAAGGATT TCCTGGAACT TTAGTACAGT GGAACATTAA AATATCATGA
|
Protein sequence | MKKKIQFFHK TRARVIQRKA LKKAQRKTRS KQTSSTGRPK KLGAAEIIYA PLEFSIYELA EGDTQKYSEA IDFIEKIKSI DHSKSYIIDF SNTERVTAAA LLLLYATIDQ KKVTGPVNSS IVWPHSDSAR RVIVKSGLNK LLQNTLNTEE PDFSNTIISG VGNDKVESLI DHIEQSVYKN QMDDEVEYLY GDAISETINN VGRHAYPESN ASDKKWWILC DVIGDKLFVL IYDCGIGIPK TVVKRNWFIS SVEKFYPEQY AEAKQAPASQ SKLYFFGSLK DENLIDLAMK QDVTGTLKSK HGQGSKSIKA LVSETHRGKL WIYSNKGLLT FKNVDTPVDL HTLNKGFPGT LVQWNIKIS
|
| |