| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3643 |
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| Symbol | |
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| ID | 5664028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4430832 |
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| End bp | 4431809 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641238303 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001503489 |
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| Protein GI | 157963455 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAACT TATCCTCCTC GATATTGCAC ACCGGCCTGC GTTTGCTGTT GCTGCTCTTT
CTCGTTGTCG TGTTTGCCTA TGTTTTGCTA AGTTGGTCGC CACTGGATCC GATTAATGCC
TATCTTGGCG GCAATGTTTT TGCCGTCTCA GAAGCGCAAA AATCCCTGTT AGTGAGCCAG
TTGGCGTTGG ATCAAAGTGT CGGTGAGCGT TTGATGCATT GGCTTTCGGG TTTAATGCAG
GGGGAGCTTG GTTACTCAAG CCTCTATCAG CAACCCGTGT CGAGTGTGAT TGCAGAGCAG
TTACCGTTAT CACTGCTATT GATTGGCTTA AGCTGGATCT GCTCATTAGT TTTCGGCTAT
CTGCTTGGCT TAGTCGCGGC TATTTATCGC GGCGGTTGGT TAGATCGCAT CATTCAAAAG
CTGGCATGGT TGATGGTCTG TATGCCGTCG TTCTGGCTAG CTATGCTGCT TATCAGCCTA
TTTTCAATCG GCCTTAGCCT GACACCCGTT TGCTGTGCCG CCCCGATCGG CATGACCTTT
ATGGATCAGT CGTTAGGCAG CATGGTGCTA CACCTGATGT TGCCCGTCGC GACATTGACC
CTTGTGAGCA TGGCGCCGAT CATGCTGCAT ACTCGGGAGA AGGTGATCGA TGTATTGCAG
TCAGATTATG TGCAGTACTC CTTAGCCCAT GGCGATAGCT TATCTAGAGT GGTGTTGTTT
CATGTGATCC GCAATAGTCT GCTGCCTGCG ATTATCTTGC AGTTTGCCAC CATCGCTGAG
TTGTTTGGCG GCTCCTTGAT TGCCGAGACG GTATTTAGCT TTCCAGGGCT CGGGGCTGGT
ATTGTGAAAG CGGGATTGGC TAGCGATACG GCTTTATTAA TGGGCTGCAC GTTAATATCT
GCGCTATTGG TATTTAGTGG CAACCTGATC GCTAACCTAC TGTCAGGTTA TTTTATGCTA
GAGGCTAATG ATGTATAA
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| Protein sequence | MSNLSSSILH TGLRLLLLLF LVVVFAYVLL SWSPLDPINA YLGGNVFAVS EAQKSLLVSQ
LALDQSVGER LMHWLSGLMQ GELGYSSLYQ QPVSSVIAEQ LPLSLLLIGL SWICSLVFGY
LLGLVAAIYR GGWLDRIIQK LAWLMVCMPS FWLAMLLISL FSIGLSLTPV CCAAPIGMTF
MDQSLGSMVL HLMLPVATLT LVSMAPIMLH TREKVIDVLQ SDYVQYSLAH GDSLSRVVLF
HVIRNSLLPA IILQFATIAE LFGGSLIAET VFSFPGLGAG IVKAGLASDT ALLMGCTLIS
ALLVFSGNLI ANLLSGYFML EANDV
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