| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3642 |
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| Symbol | |
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| ID | 5664027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4430009 |
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| End bp | 4430839 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641238302 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001503488 |
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| Protein GI | 157963454 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATAAAG CCCTACGCCA ACCGAGTTTT ATCTTGGCTA GTCTCAGCTT GTTAAGCTTA
GTGATATTAG CCTTTTTCTG GCCTTGGTTG GGGGATGAAC TCAACCTTCT CAATAAATAC
CAGGCTCCCT CGATAGCTTA CCCCTTTGGC ACTGACTGGC TAGGGCGAGA TCTGTTTAGC
CGCAGCTTAC AGGCACTGGC GCAGAGCATT TATGTGGGGG GCCTTGCCGT GCTGATGAGT
AGCCTTTTGT CACTGGCAAT GGCGATGTTT GCCATGTTGC ACCCCTATTG CCGTTGGGTG
GTCGACTTGC TGGTGGATCT GTTTATGTCG CTGCCGCACC TGCTGCTACT GATCTTATTT
TCGCTAGTGT TTGGTGGTGC AGAGGGGGGC TTAGTGATCG CCATTGCCCT GAGCCACTGG
CCAAAGCTCA CGCGGCTGCT GCGTTTCGAG ATGCAGCAAG TGCAATCGAC CCCCTACTAC
CGCCTCGCTG AGCAGTTTGG CTGCAAGCCA TGGCAGCGAC TACGAACACA TATGCTGCCG
CATATTCTGC CTCAATGGTG GATTGGCGGC TTACTGTTAT TTCCCCATGC ATTGACTCAT
ATGGCAGCCT TAACCTTTTT AGGCTTTGGG TTAAATCCTG ATAATCCCTC TATGGGGGCG
CTGTTAGCGC AGGCCAGCCA GTATGTGTTA ACTGGTCATT GGTGGCTGGG TGTATGCCCG
GGGCTAATGC TACTCGTTTG CTTATTGCTG CTGTCTTTTA TTGCCCAGCG TTTGTTAGTC
GCGCTGCGCC AGGGGCCGCA GACTCATGTT AAAGGAGAGG CGTCATGCTG A
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| Protein sequence | MYKALRQPSF ILASLSLLSL VILAFFWPWL GDELNLLNKY QAPSIAYPFG TDWLGRDLFS
RSLQALAQSI YVGGLAVLMS SLLSLAMAMF AMLHPYCRWV VDLLVDLFMS LPHLLLLILF
SLVFGGAEGG LVIAIALSHW PKLTRLLRFE MQQVQSTPYY RLAEQFGCKP WQRLRTHMLP
HILPQWWIGG LLLFPHALTH MAALTFLGFG LNPDNPSMGA LLAQASQYVL TGHWWLGVCP
GLMLLVCLLL LSFIAQRLLV ALRQGPQTHV KGEASC
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