| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3578 |
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| Symbol | |
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| ID | 5663964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4368327 |
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| End bp | 4369094 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641238240 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001503426 |
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| Protein GI | 157963392 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.920861 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGACAGA TGAATAACAG TGCATGGTTA ATAGATGAAA GTAAGTCTGA TTTAACACCA
TTAGCTGAAG AGATCCTCAA TAGTATTAAA TCCCCAATTG CGGATTTGGG CTTCGGTGGG
TTTTGGTTTC AAGGAATCGC CAATAGCGCT TACCAAGACT ACTTAGGTAA CAACCGTAAG
AGTCTACTGA CACGTAAAGT GCTAAGAAGC AGCGGCGGCG TTTTTTCTTC TTCACCGACG
GTTAAGCAGC TGCATCAACA ATACGTAACA CGTGTTGCGC CTACCGATAT TAACTTTGCA
GCCGCCTTGC GACTCGATTC CCCCTATCAC TATGTTCTTT GTGAAGATGG TCAGCCGACT
AAAGTTCAAA AACTGTTCAA TAGCCACGGT ATTAATACGG TTCTTAGTTG GCCGCTGAAG
CATTTTGCAT CAGATACTTG GAGTGGTCGA TTTACATTAT TATCAAAATA TCCATATGAA
GAGTTAAGGC TTACAGAATT AGAACAGACA CTAAAGCAAG CTCAACTGAC GATATTTGAA
CATTTTCATA ATGAGATAAA CCCATACCGT CAATATAACC TGTTTAATCA AACAGCAATA
AGAGCATTGA GGATGGCTGC GATTGGATTA CATAATCGCG AGATTTCAGA GCAATTGGAT
ATTACCGTTC GTGGGGTGGA ATACCACCTT GAATCTTTAA GAAATAAGTT GTCTGCCAGT
AATAGGACCA ATTTAGTTCA TATCGCTCAT CAACTGGAAA TTATATAG
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| Protein sequence | MGQMNNSAWL IDESKSDLTP LAEEILNSIK SPIADLGFGG FWFQGIANSA YQDYLGNNRK
SLLTRKVLRS SGGVFSSSPT VKQLHQQYVT RVAPTDINFA AALRLDSPYH YVLCEDGQPT
KVQKLFNSHG INTVLSWPLK HFASDTWSGR FTLLSKYPYE ELRLTELEQT LKQAQLTIFE
HFHNEINPYR QYNLFNQTAI RALRMAAIGL HNREISEQLD ITVRGVEYHL ESLRNKLSAS
NRTNLVHIAH QLEII
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