| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3550 |
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| Symbol | |
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| ID | 5663936 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4335226 |
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| End bp | 4336104 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238212 |
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| Product | hypothetical protein |
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| Protein accession | YP_001503398 |
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| Protein GI | 157963364 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.582499 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACAATA AAAAAACAGG GCTGTTAGAA CTACACTTTG CGGTACTACT TTTTGGTGGT
ACCGCACTAT TCTCCAAGCT TATTCCCCTT AGCGCACTCG ACATTACCTT ACTACGCTGC
GTCGTTGCTG CCATTGTGCT TGCGCTAATC GTAAAACTCA GCAAGCAACG TCTGTTATTA
AACGCAAACA AAGACTACTT CATTGCAATA GGACTTGGCA TCATCGTCAG TCTGCACTGG
GTAACCTATT TTGCCTCAAT GCAACTATCA TCGGTCGCCA TAGGCATGAT TGCGTTCTTT
ACCTATCCGG TAATGACGGT GTTAGTCGAA CCGATAGTCA CAAAAACTAA ACTCAAACTA
GCGGATGTGA TTAGTGGCAT AGTCGTGCTC ATTGGTGTGT CCTTGCTGAT CCCAGAAGCA
AACCTAGGTA ATGACGTCAC ACTAGGAATC GCTATTGGCA TTTTATCTGC CGCTTTCTTT
ACTGCTCGCA ACCTACTGCA CAAACGTTAT TTCAGCGCAT ACAGTGGCAA ACAAGCCATG
TTCTATCAGA CCTCTGTTGC CGTTTTCTTT TTAGCCCCCT GGCTAAGCGT TGAAATCAGT
AGCATAGAAC AAAATGTATG GTGGTTGATT ATTTTACTCG GGGTGGTCTT TACCGCTGCG
CCCCACGCTC TGTTTACCTC GGCATTAAGG CTCCTAAGCG CAAAAACCGT AGGCTTGGTC
TCCTGCCTAC AACCTTTTTA CGGTGCCATG TTGGCGCTAA TTTTACTGGG GGAAGACTTA
GCGCTAAAAA CGGTTATTGG CGGAACTTTA GTCGTTGCTA CTGCACTATT CGAAACTCAG
CAAAGCCACA GATCGAATAG GATAAAAAAG ACTGCTTAG
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| Protein sequence | MDNKKTGLLE LHFAVLLFGG TALFSKLIPL SALDITLLRC VVAAIVLALI VKLSKQRLLL
NANKDYFIAI GLGIIVSLHW VTYFASMQLS SVAIGMIAFF TYPVMTVLVE PIVTKTKLKL
ADVISGIVVL IGVSLLIPEA NLGNDVTLGI AIGILSAAFF TARNLLHKRY FSAYSGKQAM
FYQTSVAVFF LAPWLSVEIS SIEQNVWWLI ILLGVVFTAA PHALFTSALR LLSAKTVGLV
SCLQPFYGAM LALILLGEDL ALKTVIGGTL VVATALFETQ QSHRSNRIKK TA
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