Gene Spea_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3548 
Symbol 
ID5663934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4333117 
End bp4334181 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content46% 
IMG OID641238210 
Productribosome-associated GTPase 
Protein accessionYP_001503396 
Protein GI157963362 
COG category[R] General function prediction only 
COG ID[COG1162] Predicted GTPases 
TIGRFAM ID[TIGR00157] ribosome small subunit-dependent GTPase A 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.814958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAAAA AGAAACCGCT AAGCCATGGT CAATTACGCA GAATGCGGAC CAACCAAAAA 
AAGAAATTAC AGAGCCACGA TGCAGGTGAA ACTACTGACT TACAAGACAG TATGTTAGGC 
CCTGAGCAAC AAGGCACCAT TATTTCACGC TTCGGCCAAC ACGCTGACGT CGAGACTGAC 
TCTGGCCACC TTGCTCGCTG TAATATTCGC CGTAATATTA AGAGCCTAGT GACTGGTGAT 
AACGTTATCG TTCGTTTAGC ACTGACCAGT GAGTCAGGGG CTAGTCGTAT CGAAGGTATT 
GTTGAAGCTG TGCATCCAAG GCACTCTCAG CTCTCACGCC CAGATCTTTA CGATGGCGTG 
AAAATCATTG CTGCGAACAT CGATCAGATT TTAATTGTCA CTTCTGTAAA GCCAGCATTT 
ACCACCCAGA TTATTGATCG CTACCTAGTC GCGGCTGAAG ATACTGGTAT CGAACCTGTC 
ATCATCTTAA ATAAAGTTGA CTTGATAACG CCAGAAGAAG CGCCTGAGAT CGATGCAGCG 
CTTGAGAGAT ATAAGAGCAT TGGCTATCGA GTCTATCGAG TGAGTAGCAA AACAGGTGAA 
GGTGTTGAAC AGCTTCATGC CTTGATGAAC GACAAAGTAA ACGTGTTTGT TGGTCAATCG 
GGTGTAGGTA AATCTTCAAT GATTAACGCC ATGATGCCAG ATGCAGAGCT TATTACTGGT 
GATATTTCTG AGAACTCAGG GCTAGGTCAG CACACGACCA CCACGGCAAA ACTTCTGCAT 
ATTTCAACTG GCGGAGATTT AATTGACTCT CCTGGTGTGC GAGAATTCGC GCTATGGCAC 
CTGCCCGCTG ACAGAGTCGG CTGGTGTTTC GTTGAATTTA GAGATTATTT AGGTACTTGT 
AAATTTAGAG ACTGCAAACA CTTAAACGAT CCAGGATGCT CGATTACCGA AGCGTTCAAT 
GCCGGTGAGA TCACTGAAGA CAGATACAAT AATTACCATC GTATTATTGC CAGTCTGGAT 
GAGCAAAGAC ACGCTCGTCA CTTTAGAGCC GGTCCTGACG AGTAG
 
Protein sequence
MSKKKPLSHG QLRRMRTNQK KKLQSHDAGE TTDLQDSMLG PEQQGTIISR FGQHADVETD 
SGHLARCNIR RNIKSLVTGD NVIVRLALTS ESGASRIEGI VEAVHPRHSQ LSRPDLYDGV 
KIIAANIDQI LIVTSVKPAF TTQIIDRYLV AAEDTGIEPV IILNKVDLIT PEEAPEIDAA 
LERYKSIGYR VYRVSSKTGE GVEQLHALMN DKVNVFVGQS GVGKSSMINA MMPDAELITG 
DISENSGLGQ HTTTTAKLLH ISTGGDLIDS PGVREFALWH LPADRVGWCF VEFRDYLGTC 
KFRDCKHLND PGCSITEAFN AGEITEDRYN NYHRIIASLD EQRHARHFRA GPDE