| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3540 |
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| Symbol | |
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| ID | 5663926 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 4323638 |
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| End bp | 4323916 |
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| Gene Length | 279 bp |
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| Protein Length | 92 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 641238196 |
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| Product | RNA chaperone Hfq |
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| Protein accession | YP_001503388 |
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| Protein GI | 157963354 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1923] Uncharacterized host factor I protein |
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| TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.132549 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAAAGG GGCAATCTTT ACAAGACCCG TTTTTGAACG CATTGCGTCG TGAACGCGTT
CCAGTATCTA TTTATCTTGT TAACGGCATT AAGCTTCAAG GACAAGTTGA GTCTTTCGAC
CAGTTTGTTA TTTTGCTTAA AAATACAGTA AGCCAAATGG TTTACAAGCA TGCCATTTCT
ACTGTGGTGC CTTCACGTCC ATTCAACGTG AGCAACCACC AAGCGACAAA TGCTCAAGCT
GGCTATAACG CTCAGCATGA CGATGGCGAC GAGAAGTAA
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| Protein sequence | MAKGQSLQDP FLNALRRERV PVSIYLVNGI KLQGQVESFD QFVILLKNTV SQMVYKHAIS
TVVPSRPFNV SNHQATNAQA GYNAQHDDGD EK
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