Gene Spea_3482 details

Gene Information

• Locus tag: Spea_3482
• ID: 5663868
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 4254487
• End bp: 4255176
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641238138
• Product: phage shock protein A, PspA
• Protein accession: YP_001503330
• Protein GI: 157963296
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1842] Phage shock protein A (IM30), suppresses sigma54-dependent transcription

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0916026
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGCATTC TAAACAAAAT TCTTACGGCC TTCCGTGGCG GTGCTACTGA AGTTGGCCAA 
GGCATCGTTG ATGCTAACTC TACACGTATT TTTGAACAAG AGATCCGTGA TGCAGAGAAA 
CACCTCACTA AGGCTAAGCG TGACTTAACT GAAGTGATGG CCAAAGAGAT GCAAGCGAGC 
CGTGAAGTCG ATCGCCTAAA GCGTTCAATT GCCGAGCACG AAGGCTACGT AACTCAAGCA 
CTTGAGAAAG GTGACGAGCC GCTAGCACTT GAAGTGGCTG AAAAAATTGC TGAACTTGAC 
CAAGAGCTTA ACGATCAACA GTCGGCAAAT GATAGCTTCA GCGCACACGC TACACGCCTA 
AAAGAGCTAG TACGTAAAAC TGAGCGTCAA GTGACTGATT ACCAGCGTCA ATTAACTATG 
GTTAAAACCA CTGAGAGCGT GCAGAAAGCG ACGGCGACTA TTACCGACTC ATTTGCAGGC 
AGTAACTCTA AGTTACTTAA TGCTAAAGAT TCGCTAGAGC GTATCAAGGC TCGCCAGCAG 
TCATTTGATG ACCGCCTAAA AGCCTCTGAA ACGTTAGCTG AAGAGAACAG TGACAAGGCG 
CTGCACGACA AGCTAGCAGC AGCTGGTATT GGTGAGCAAA AGTCTAACGC TAACGCCGTA 
CTTGACCGCA TTAAAGCGCG TAAGGGCTAA 

 

Protein sequence

MGILNKILTA FRGGATEVGQ GIVDANSTRI FEQEIRDAEK HLTKAKRDLT EVMAKEMQAS 
REVDRLKRSI AEHEGYVTQA LEKGDEPLAL EVAEKIAELD QELNDQQSAN DSFSAHATRL 
KELVRKTERQ VTDYQRQLTM VKTTESVQKA TATITDSFAG SNSKLLNAKD SLERIKARQQ 
SFDDRLKASE TLAEENSDKA LHDKLAAAGI GEQKSNANAV LDRIKARKG