Gene Spea_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3438 
Symbol 
ID5663824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp4203857 
End bp4204609 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content45% 
IMG OID641238094 
Productwinged helix family two component response transcriptional regulator 
Protein accessionYP_001503286 
Protein GI157963252 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACTGG GGCATTGCAG ATTTGATATT GATAAACAAG AGCTGACAAA CCTAGACAGT 
GGTGATGTTT GGCACCTGCC TAGAGCCGAA TTTCAAGTCT TATGTCTGCT GATTGACTAT
CAAGGCAAAG TCGTTGCTAA GCCGTTATTG AAAAAAGGCG ATGGTGAGCA AGCCCCTCTG
AGTGACTCCT CTGTGACTCG CGCCGTGTTT ACACTGAGAT CATTTCTCGG CCCACAATAT
GAATCGCTCA TAGAAACAGT AAAAGGCCAA GGCTACCTGC TACGACATCA CCGCTGCCGC
AAAGAAAAAT ACTCGAGTTC AGATATAAAC AGATTCTCAG CTAAGTTATT GGCGGGGGTA
GCAGTGGTTT TACTTGTCAT CTTCAGCTGT GGTTGGATAG TTTATGACTC CACTCGCATA
TCTGTATCGA CTCCAGTCCC TTTGCAGAGC AACAAGGTTA AGACAATCTC AGGCCATACG
GTCAAGGTTA TTCTCTATGC CCACTCCAAA ACCAATAATG GCTTATTGAC CGAACTCGGG
CAGACCATGT TGCAAAGCTT CAGCCAATGC AAACTCACCA GCTGGAAGAA TGTCTATCTA
TCTCTGTCAC ACGATAAACA AGTCCTCAAT GTCACTCTAC GTGGTGAGCA ATTTGGCCAG
TCGATTATTC GCAACTTAAA AATTAGTGAC CTACGCCAAC CTAAACAGTT TATTAATCAG
CAATGGCTGC AAGGTGTGGA CATTTGTGAC TAG
 
Protein sequence
MQLGHCRFDI DKQELTNLDS GDVWHLPRAE FQVLCLLIDY QGKVVAKPLL KKGDGEQAPL 
SDSSVTRAVF TLRSFLGPQY ESLIETVKGQ GYLLRHHRCR KEKYSSSDIN RFSAKLLAGV
AVVLLVIFSC GWIVYDSTRI SVSTPVPLQS NKVKTISGHT VKVILYAHSK TNNGLLTELG
QTMLQSFSQC KLTSWKNVYL SLSHDKQVLN VTLRGEQFGQ SIIRNLKISD LRQPKQFINQ
QWLQGVDICD