| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_3438 |
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| Symbol | |
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| ID | 5663824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 4203857 |
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| End bp | 4204609 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641238094 |
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| Product | winged helix family two component response transcriptional regulator |
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| Protein accession | YP_001503286 |
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| Protein GI | 157963252 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAACTGG GGCATTGCAG ATTTGATATT GATAAACAAG AGCTGACAAA CCTAGACAGT
GGTGATGTTT GGCACCTGCC TAGAGCCGAA TTTCAAGTCT TATGTCTGCT GATTGACTAT
CAAGGCAAAG TCGTTGCTAA GCCGTTATTG AAAAAAGGCG ATGGTGAGCA AGCCCCTCTG
AGTGACTCCT CTGTGACTCG CGCCGTGTTT ACACTGAGAT CATTTCTCGG CCCACAATAT
GAATCGCTCA TAGAAACAGT AAAAGGCCAA GGCTACCTGC TACGACATCA CCGCTGCCGC
AAAGAAAAAT ACTCGAGTTC AGATATAAAC AGATTCTCAG CTAAGTTATT GGCGGGGGTA
GCAGTGGTTT TACTTGTCAT CTTCAGCTGT GGTTGGATAG TTTATGACTC CACTCGCATA
TCTGTATCGA CTCCAGTCCC TTTGCAGAGC AACAAGGTTA AGACAATCTC AGGCCATACG
GTCAAGGTTA TTCTCTATGC CCACTCCAAA ACCAATAATG GCTTATTGAC CGAACTCGGG
CAGACCATGT TGCAAAGCTT CAGCCAATGC AAACTCACCA GCTGGAAGAA TGTCTATCTA
TCTCTGTCAC ACGATAAACA AGTCCTCAAT GTCACTCTAC GTGGTGAGCA ATTTGGCCAG
TCGATTATTC GCAACTTAAA AATTAGTGAC CTACGCCAAC CTAAACAGTT TATTAATCAG
CAATGGCTGC AAGGTGTGGA CATTTGTGAC TAG
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| Protein sequence | MQLGHCRFDI DKQELTNLDS GDVWHLPRAE FQVLCLLIDY QGKVVAKPLL KKGDGEQAPL
SDSSVTRAVF TLRSFLGPQY ESLIETVKGQ GYLLRHHRCR KEKYSSSDIN RFSAKLLAGV
AVVLLVIFSC GWIVYDSTRI SVSTPVPLQS NKVKTISGHT VKVILYAHSK TNNGLLTELG
QTMLQSFSQC KLTSWKNVYL SLSHDKQVLN VTLRGEQFGQ SIIRNLKISD LRQPKQFINQ
QWLQGVDICD
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