Gene Spea_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3353 
Symbol 
ID5663741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4097920 
End bp4098498 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content49% 
IMG OID641238011 
Producthypothetical protein 
Protein accessionYP_001503203 
Protein GI157963169 
COG category[S] Function unknown 
COG ID[COG3803] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.227691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGAC TAGCCACAGA GCACACATCG GCGCAGCCAA TTACCCCTGA TATGATTATT 
CACTTCTGGT TTGAAGAGAT TGAGCCGAAA CAGTGGTGGA TAAAAGACGC TGAGTTTGAC 
GAGTTAATTA AGCAGCGTTA TGCCAGCTTA TTAGCACAAG CAATCCAAGG CGAGCTCTAT 
CACTGGCGGG CTACGCCGCA AGGAAGGCTT GCCGAGATCA TCGTGTTAGA CCAATTCTCG 
CGCAACATTT ACCGTGACAG CGCAAAAGCC TTTGCCGCCG ATGCCATTGC ACTGGTGCTT 
GCGCAAGAGG CTGTCGCGAT TAATAGCGAC TCCGAGCTAA AAGCTAAGCA GGTGCCGTTT 
CTGTTTATGC CCTATATGCA CAGCGAATCG CCATTAGTGC ATGAAGTGGC GGTTAGGCTA 
TTTAGTCGCG ATGCAGCTAA AGGTAATTTA GATTTTGAGC TCAGGCACAA GGCTATCATC 
GACCAGTTTG GTCGTTATCC TCACCGCAAT TCCATCTTAG ACCGTGAGTC TACCGTCGAA 
GAGATAGCTT TCTTACAGCA ACCGGGCTCC AGTTTCTAA
 
Protein sequence
MNRLATEHTS AQPITPDMII HFWFEEIEPK QWWIKDAEFD ELIKQRYASL LAQAIQGELY 
HWRATPQGRL AEIIVLDQFS RNIYRDSAKA FAADAIALVL AQEAVAINSD SELKAKQVPF 
LFMPYMHSES PLVHEVAVRL FSRDAAKGNL DFELRHKAII DQFGRYPHRN SILDRESTVE 
EIAFLQQPGS SF