Gene Spea_3351 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3351 
Symbol 
ID5663739 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp4095763 
End bp4096413 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content49% 
IMG OID641238009 
Productmembrane-flanked domain-containing protein 
Protein accessionYP_001503201 
Protein GI157963167 
COG category[S] Function unknown 
COG ID[COG3402] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0577899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGCA GCAAAAATAT CAGCAACGAA GCTGACTCTA TTAACGAACA AGCTTGCCAT 
GACTTAATAG CACCGAGTGA GTGGCAAGGC TTCGATCAGG TACTACTTCA GCCTGTCGAT 
AAACGCCATT ACACCCAAGT GCTATGCGAA AGCCTGATAT TTGGCGGCAT CGCGTTTATT 
GCAGTGTCTC TGGCCGTGTT CCTCCCCAGA GAGCTACAAC TTCCTCTATT ACTGGCCGTA 
CTGACTGGCC TACTACTATT ATTGGCAACC GTTGGCTACT TGAGAGACCG ACATGCCAAG 
TCGCTGGCTT ACGCAACATG CGAACATGAA CTTATTATGC AGAAAGGCTT TTGGTGGGTT 
AAACGTACCT CGCTTCCCTA TTCGCGACTA CAGCATGTTA GCCTGTCTCA TGGCCCGCTT 
GAGCGCCATT TTAATCTATC CACCATCAAA TGTTTCAGTG CGGGTAGCGG ATCGGCTGAG 
ATTGAATTAC CCGGTATAGA GCAAGATACA GCAGAACACC TGCGCCAGCA TCTGCTCGCC 
CAAGCGGCGA AAGCCAATCC GCAACTACCG TTAGAAATGG CTTCGCAACA GAAGGAACTT 
GAAGATACCC CACAGACCAT CACTCCGGAA AGGTCTAACG ATGACTCATA A
 
Protein sequence
MDSSKNISNE ADSINEQACH DLIAPSEWQG FDQVLLQPVD KRHYTQVLCE SLIFGGIAFI 
AVSLAVFLPR ELQLPLLLAV LTGLLLLLAT VGYLRDRHAK SLAYATCEHE LIMQKGFWWV 
KRTSLPYSRL QHVSLSHGPL ERHFNLSTIK CFSAGSGSAE IELPGIEQDT AEHLRQHLLA 
QAAKANPQLP LEMASQQKEL EDTPQTITPE RSNDDS