Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3285 |
Symbol | |
ID | 5663673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 4026289 |
End bp | 4027779 |
Gene Length | 1491 bp |
Protein Length | 496 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641237943 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_001503135 |
Protein GI | 157963101 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0676667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCACT CTTTGGATCT ATTGCTACAG CTAACCATTA TATTGCCGCT GCTTGCCACT TTGGCGATCT TGGCAACGGG AAAGCACCCC AACCTTCGTG AGGCTGTAAC GATAAGCATC AGCCTTGCCG TTATGTACTG TGTGATAAAC CTATATCAAG GGCTCAGTGC AGGCGCATCT ATCGAGGTGT TTTGGTGGCA ACTGCTACCG GGCTTGGAAG TGAGCTTTGT GGTTGAGCCT TTAGGTATGC TGTTTGCCCT CATTGCCAGC TTTCTGTGGC TCATTACCAC CCTATACGCC ATCGGCTATA TGCGCGGCCA TGGGGAGGAG AATCAAACCC GCTTTTACCT CTGCTTTGCG TTGGCCATAA GCGCAGTGAT GGGATTAGCA TTTTCCGCCA ACCTGTTTAC CCTGTTTATC TTCTACGAAG TCTTGACCCT GTCCACCTAT CCTTTAGTGA CCCACGCTGG CACAGAAAAA GCCAAGCAAG GGGGGCGCGT ATACTTAGGG ATCTTACTCG GGACCTCCAT CGCCTTCTTC CTTTTAGCGA TTATCTTGAC CTGGTTTGTG GCCGGCACCT TAGACTTCAA ACCCGGCGGC GTGTTTCACA CTGATGTTGA TACCAGCTTA CTGGGAGCCA TACTGGTACT GTTTGTGTTT GGTATTGGTA AGGCGGCCAT CATGCCGTTC CATCGTTGGC TCCCCGCCGC TATGGTGGCG CCAACACCGG TGAGTGCCCT GCTGCATGCG GTAGCTGTGG TCAAGGCTGG GGTGTTCACC ATCTTAAAGA TCTGCGTGTT TATCTTTGGT ATCGAGCTAC TACCTACTCT GCCTACGACC GAATTCCTGC TCTATTTAGC TGGCGCATCG GTATTGCTCG CCTCCATAGT GGCAATGCGT CAGGATAACT TAAAAGCACG ACTCGCCTAC TCAACGGTGA GTCAACTGGG CTATATCACC ATAGGCGCAC TGCTGGCCAC CTCATCAGGG GTCATTGGTA GCTCGATGCA TATTGCAACC CACGCTTTTG GCAAGATCAC CCTATTCTTC TGTGCAGGCG CGATTCTGGT TGCGACCCAT AAATCAAAAG TAAGTGAAAT GCGCGGCCTC GGCTTTACCA TGCCTGTCAC CATGGCGGCT TTTTTTATCG CCAGTCTAAG TATTATTGGT GTTCCACCCG CAGGCGGTAC GTGGAGTAAG TGGTTCCTGT TAATGGGCAC AATGGAAACC GAACATTGGG TCATTATGAT GGTGCTGATG GTGAGCTCTC TGCTCAATAT CGCCTATCTT CTACCTATTC CATACCATGC CTTTTTCCCA GGCAAGGGCC ATGCCGCAAC TAAGACTGGG ATCAAGGAAG CCCCTCTCAT GTCATTAATC GCGCTGTCCA TCACCACCCT AGGTTGCTTG ATTCTATTCA TCTATCCGCA ACCCCTCTAT GAGTTGGCAA AAACCATCTT AACTGTACCG GGAGTCAGCC ATGGACAATA A
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Protein sequence | MNHSLDLLLQ LTIILPLLAT LAILATGKHP NLREAVTISI SLAVMYCVIN LYQGLSAGAS IEVFWWQLLP GLEVSFVVEP LGMLFALIAS FLWLITTLYA IGYMRGHGEE NQTRFYLCFA LAISAVMGLA FSANLFTLFI FYEVLTLSTY PLVTHAGTEK AKQGGRVYLG ILLGTSIAFF LLAIILTWFV AGTLDFKPGG VFHTDVDTSL LGAILVLFVF GIGKAAIMPF HRWLPAAMVA PTPVSALLHA VAVVKAGVFT ILKICVFIFG IELLPTLPTT EFLLYLAGAS VLLASIVAMR QDNLKARLAY STVSQLGYIT IGALLATSSG VIGSSMHIAT HAFGKITLFF CAGAILVATH KSKVSEMRGL GFTMPVTMAA FFIASLSIIG VPPAGGTWSK WFLLMGTMET EHWVIMMVLM VSSLLNIAYL LPIPYHAFFP GKGHAATKTG IKEAPLMSLI ALSITTLGCL ILFIYPQPLY ELAKTILTVP GVSHGQ
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