Gene Spea_3249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3249 
Symbol 
ID5663638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3985774 
End bp3986421 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content47% 
IMG OID641237908 
ProductGntR family transcriptional regulator 
Protein accessionYP_001503100 
Protein GI157963066 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATTA ATGACGTAGC GAATAAATCT GAATTTGCAT ACGACCAACT CGAAAAAATG 
ATTACTTTCA GGGAGCTTAA GCCGGGTTCC ATGGTCAGTG AGAAACAACT TTCAGAGCAA 
CTCGGTGTTG GCCGAACGCC GGTTCGCGAA GCACTACAAC GTTTATCCTA CGAGCGAATG 
GTAGAAATCC ATCCTAGGCG TGGCATTCAA ATTCCACAGA TCTCGTTAGA AAGCCAACTC 
AAGATCTTAG AGGTGCGCAG AGATGTCGAA GCATTGTGTG CGCGTTTTGC TGCGACCCGA 
GCCTCCGAGT CAGAAAAGAT CCGTATGACC AAGCTGGCTA ATCAATTAGA AGCGAATGCC 
ACCAAGCAAG ATGACTTAGT CTATGCTCAG CTACTTAAGC AGATCCATAT CTTGTTAGTT 
CAGGTCTCTA ATAATGAATA TCTGCAATTG GCGATGGCGC CATTGCAAGG GCTATCGCGT 
CGCTTCTGGT TCGCCTACAA GAATGAATCT AGCGATCTGG CCGATGCAGC GAATTTACAT 
GCAACCATAC TGCGTAAAAT TGTTGCAGGT GATCCTGTTG CTGCCGTTGA AGCATCTTAT 
GCGCTCAATG ACTACCTCAC TAACATGGCT CGGCGCACGA TAAGCTAA
 
Protein sequence
MIINDVANKS EFAYDQLEKM ITFRELKPGS MVSEKQLSEQ LGVGRTPVRE ALQRLSYERM 
VEIHPRRGIQ IPQISLESQL KILEVRRDVE ALCARFAATR ASESEKIRMT KLANQLEANA 
TKQDDLVYAQ LLKQIHILLV QVSNNEYLQL AMAPLQGLSR RFWFAYKNES SDLADAANLH 
ATILRKIVAG DPVAAVEASY ALNDYLTNMA RRTIS