Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3165 |
Symbol | |
ID | 5663554 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3877014 |
End bp | 3877760 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237823 |
Product | hypothetical protein |
Protein accession | YP_001503016 |
Protein GI | 157962982 |
COG category | [S] Function unknown |
COG ID | [COG1496] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00726] uncharacterized protein, YfiH family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0488343 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGTA ATAATGAACA TCAAGCTTGG TTTATTCCAT CTGGAGTAAG CCTAGCTTTT TCGACTCGTG AAGGTGGCTG CAGCCAGTCT CCTTACGCTA GCCTTAATTT AGGGCTACAT GTTGGTGATG ATCCGCAAAA GGTCTTAGCT AATCGTCAAC TCATCGCAGA GGAACTTAAT CTTCCTGCAA AGCCTGCCTG GCTCGAGCAA ATTCACAGTG TCGACATCGT CGATGCCGAT CACTCACAAG TTCATCATGC CGATGGTAGC TACACTCGAA GTGAACAACA AGTGTGTGTG GTGATGACCG CAGATTGTCT GCCGGTATTA TTATGTGATG AAAATGGCAC CGAAGTCGCG GCTGTACATG CCGGATGGCG TGGTTTGTGT GACGGTATCA TTGAAGTTGC AATTGGTAAG TTTAGTCATA TGCCTGCAGA GCTTATTGCT TATCTTGGCC CTGCAATCGG TCCAACTGCA TTTGAAGTAG GTGCTGAAGT TAAAGCGCAA TTTGAAGCAA AACACCCGCA AACAAGTCAG TTTTTCTCTG CTCATGTCAA TGCTGATGGG GAACAAAAGT TTATGGCTGA TATTCACGGA TTAGCCAGAT TTAGATTGTC GTTATTGGGC GTAAAACGTA TTTATAGCGA TCCACGCTGC ACAGTTTCTG ACACAGAAAC ATTTTTTTCC TATCGCCGCG AAGGCATTAC CGGCCGCATG GCATCATTTA TTTGGCTTAG TCGCTAA
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Protein sequence | MSRNNEHQAW FIPSGVSLAF STREGGCSQS PYASLNLGLH VGDDPQKVLA NRQLIAEELN LPAKPAWLEQ IHSVDIVDAD HSQVHHADGS YTRSEQQVCV VMTADCLPVL LCDENGTEVA AVHAGWRGLC DGIIEVAIGK FSHMPAELIA YLGPAIGPTA FEVGAEVKAQ FEAKHPQTSQ FFSAHVNADG EQKFMADIHG LARFRLSLLG VKRIYSDPRC TVSDTETFFS YRREGITGRM ASFIWLSR
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