Gene Spea_3165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3165 
Symbol 
ID5663554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3877014 
End bp3877760 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content45% 
IMG OID641237823 
Producthypothetical protein 
Protein accessionYP_001503016 
Protein GI157962982 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0488343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGTA ATAATGAACA TCAAGCTTGG TTTATTCCAT CTGGAGTAAG CCTAGCTTTT 
TCGACTCGTG AAGGTGGCTG CAGCCAGTCT CCTTACGCTA GCCTTAATTT AGGGCTACAT
GTTGGTGATG ATCCGCAAAA GGTCTTAGCT AATCGTCAAC TCATCGCAGA GGAACTTAAT
CTTCCTGCAA AGCCTGCCTG GCTCGAGCAA ATTCACAGTG TCGACATCGT CGATGCCGAT
CACTCACAAG TTCATCATGC CGATGGTAGC TACACTCGAA GTGAACAACA AGTGTGTGTG
GTGATGACCG CAGATTGTCT GCCGGTATTA TTATGTGATG AAAATGGCAC CGAAGTCGCG
GCTGTACATG CCGGATGGCG TGGTTTGTGT GACGGTATCA TTGAAGTTGC AATTGGTAAG
TTTAGTCATA TGCCTGCAGA GCTTATTGCT TATCTTGGCC CTGCAATCGG TCCAACTGCA
TTTGAAGTAG GTGCTGAAGT TAAAGCGCAA TTTGAAGCAA AACACCCGCA AACAAGTCAG
TTTTTCTCTG CTCATGTCAA TGCTGATGGG GAACAAAAGT TTATGGCTGA TATTCACGGA
TTAGCCAGAT TTAGATTGTC GTTATTGGGC GTAAAACGTA TTTATAGCGA TCCACGCTGC
ACAGTTTCTG ACACAGAAAC ATTTTTTTCC TATCGCCGCG AAGGCATTAC CGGCCGCATG
GCATCATTTA TTTGGCTTAG TCGCTAA
 
Protein sequence
MSRNNEHQAW FIPSGVSLAF STREGGCSQS PYASLNLGLH VGDDPQKVLA NRQLIAEELN 
LPAKPAWLEQ IHSVDIVDAD HSQVHHADGS YTRSEQQVCV VMTADCLPVL LCDENGTEVA
AVHAGWRGLC DGIIEVAIGK FSHMPAELIA YLGPAIGPTA FEVGAEVKAQ FEAKHPQTSQ
FFSAHVNADG EQKFMADIHG LARFRLSLLG VKRIYSDPRC TVSDTETFFS YRREGITGRM
ASFIWLSR