Gene Spea_3144 details

Gene Information

• Locus tag: Spea_3144
• ID: 5663533
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 3850449
• End bp: 3850943
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641237797
• Product: rare lipoprotein B
• Protein accession: YP_001502995
• Protein GI: 157962961
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG2980] Rare lipoprotein B

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.000366189
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTAATTA AACGCATACT TTTGGCAACC TTGGCACTGA GCGTATTGCT CAGTGCCGGT 
TGCGGCTTTA GACTTCAGGG TAGCTACTCG ATTCCTGAGC AGCTACAAAC CTTGAGTCTT 
AGCAGCCAAG ACGAATACAG CGAGCTGACA CGCTTAGTAC GTGAGCGCTT ACGTTTGAAC 
CGCATTGCAG TCGTTGCTCC AGCAGAAGAT CTTCCAGCTC TGCGGATTAT TAGTGACTCG 
CTGGACCGTT CGACTCTATC TATCTATCCA ACGGGTAACG TAGCCGAATA TGAGCTTATC 
TATCAGGTCA CCTTCTCGGT ACAACTGCCA GGCGATGAGT CTCAACGTTT CGATGTAGCG 
ATTCACCGTG ACTACCTCGA TGATCCCCGC ACTGCATTAG CAAAAAGCCG AGAGATGGAG 
CTATTGCTAA AAGAGATGCG CATTCAAGCA GCCGACCGCA TTATTCAAAC TTTGGCCGCG 
ACTGAGGTTA ATTGA 

 

Protein sequence

MLIKRILLAT LALSVLLSAG CGFRLQGSYS IPEQLQTLSL SSQDEYSELT RLVRERLRLN 
RIAVVAPAED LPALRIISDS LDRSTLSIYP TGNVAEYELI YQVTFSVQLP GDESQRFDVA 
IHRDYLDDPR TALAKSREME LLLKEMRIQA ADRIIQTLAA TEVN