Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3111 |
Symbol | |
ID | 5663500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 3813481 |
End bp | 3814140 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237751 |
Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
Protein accession | YP_001502962 |
Protein GI | 157962928 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACTT GGAAAACTTG GATAACTTAT TTAACAAAAA GTTTAACGAA AAATTTAGCA AAAAAAACAA CTAAGATAGC CAAGACGCTC GCGTCACTGG TCCTGTTAAC AACGAGCCAG CTCAGCTATG CCGTAGATAT TCAGCCCAAC ACGCTTTACC CTCTCGTTGA GCTAGACACC AGCATGGGCA AGATAGTGGT GGAGTTAGAT AGAACTCGCT CGCCGATCAC AGTTGATAAC TTTCTAACCT ATGTTGTAAA AGGTCACTAT GACAACACAC TATTTCACCG TGTGATTAGC GATTTCGTGG TGCAAGGTGG CGGTTTAGAC TTAAACAAAG AAGAGCGACC GACCGATAAA CCTATCGTCA ATGAATCGGG AAACGGCCTC TCTAACCTAA CTGGCACCAT TGCCATGGCT CGAGAAGCCG AGCCACATAC CGCCACCAGC CAGTTCTACT TTAATGTAGT CGATAATGAG AAGTTAGATC CCTCTTCGCG CCGCTGGGGC TATACGGTTT TTGGTGAGGT AACCTCAGGC ATGGAAGTAT TGCAAGCCAT ATCGTTAGTG CCTACTGATT TCAATAGCCA AGTAGAGTGG CCTGACTTTC CAGTGCAAGA TATTGTTCTT AAAAAGGCGA CCTTGCTACC TCGAAATTAA
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Protein sequence | MKTWKTWITY LTKSLTKNLA KKTTKIAKTL ASLVLLTTSQ LSYAVDIQPN TLYPLVELDT SMGKIVVELD RTRSPITVDN FLTYVVKGHY DNTLFHRVIS DFVVQGGGLD LNKEERPTDK PIVNESGNGL SNLTGTIAMA REAEPHTATS QFYFNVVDNE KLDPSSRRWG YTVFGEVTSG MEVLQAISLV PTDFNSQVEW PDFPVQDIVL KKATLLPRN
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