Gene Spea_3081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3081 
Symbol 
ID5663471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3780204 
End bp3781118 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content44% 
IMG OID641237722 
Producthypothetical protein 
Protein accessionYP_001502933 
Protein GI157962899 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAATCAT CCCATCAAGC ATATCTGTTT GGTATCGGTG CCATTTTCCT ATGGTCCACC 
GTTGCAACTG CATTTAAGTT AGCGTTGGCG CACTATACGC CGCTGCAATT AGTGTTTGTC
GCTGTCATAA CATCTATCTT TGCTCTAGGT GCGATATTAA TCGCCCAAAG AAAGTTGCCG
CTGATTAAAC AGCAGTTTCT CGAAAGACCT TGGTTCTACC TGCAGACAGG ATTGTTAAAT
CCGTTTCTAT ACTATTTAGT TTTATTTAAA GCGTACGATC TACTGCCGGC TCAACAAGCT
CTGTCTCTTA ATTACACTTG GGCGATTTTA TTGCCGCTGC TGTCGGTGCC TCTGCTTGGT
CAAGCACTGC GTAAGAGCGA TATCACCGCT GCATTAGTTG CGTATTGCGG CGTATTCTTT
ATTGCTACCA AAGGTAATAT TACCGGCGTG CAATTTGAAA GCATGACTGG TGTTGCGCTG
GCCTTAACCA GCACTGTGCT CTGGTCTCTC TACTGGATCG TTAATACCAA AGATAAGGGC
GATCCCGTTG TTAGCCTACT GCTTAGCTTT TTAGTGGGGT TGCCTTTTAT TGTCGTCGCA
CTACTTATGA CTCAGTCTCT ACCGGCTTGG GATCTGAAGG CATTGTTCGC TGGTGTTTAC
GTCGGATTAT TTGAAATGGG CGTGACCTTT GTGCTTTGGC TTGTTGCCTT AAAGAAGGCT
GAGCGCACAG CCAGTATCAG CACGCTGGTA TTTATTACCC CTGTGATGTC GATAGGCTTT
ATTGCTTGGA TTTTACAAGA GAGCATCGAA AAATCGACCT ATATAGGACT CGGGTTAATT
ATATTTGCAC TAGTACTGCA GCAAATATTG CCTAAAGTTG GTCAATGGCG CACAAGAAAA
CGCATATCAG CTTAA
 
Protein sequence
MKSSHQAYLF GIGAIFLWST VATAFKLALA HYTPLQLVFV AVITSIFALG AILIAQRKLP 
LIKQQFLERP WFYLQTGLLN PFLYYLVLFK AYDLLPAQQA LSLNYTWAIL LPLLSVPLLG
QALRKSDITA ALVAYCGVFF IATKGNITGV QFESMTGVAL ALTSTVLWSL YWIVNTKDKG
DPVVSLLLSF LVGLPFIVVA LLMTQSLPAW DLKALFAGVY VGLFEMGVTF VLWLVALKKA
ERTASISTLV FITPVMSIGF IAWILQESIE KSTYIGLGLI IFALVLQQIL PKVGQWRTRK
RISA