Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_3064 |
Symbol | |
ID | 5663454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3758701 |
End bp | 3759483 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641237705 |
Product | triosephosphate isomerase |
Protein accession | YP_001502916 |
Protein GI | 157962882 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000137173 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTTA GACGTCCCAT GGTTGCTGGT AATTGGAAAA TGAACGGCAG TGCGCAGTTG GCGCAAGAGC TATTCAATAA GTTCGCTACC AAGCTCCAAG ATGATTCAGT GGAAGTGGTT TTGTGTCCAC CTTCTATTTA CTTAGAGAGT GTTCGACAAC TACTAGATGA AAATAAAGAA ACCTTAAATG GTTGCTTAGT CAGAATGGGA ACTCAAAACC TAAGTCAACA TGACTTTGGA GCCTATACTG GTGAAATATC TGGTCAGATG TTAAAGGATT CAGGATGTCG ATATGTTATT ATCGGGCATT CAGAACGTCG CCGTATGTAC GGAGAGACGA GTAACATAGT GGCAGAGAAA TTTGCTGCAG CTCAGAAACA TGGTTTGACC CCAATATTAT GTGTTGGTGA GTCGGGTCCA GCTCGTGAAG CGAGACGCAC TTTTGAAGTG ATCGCCGAAG AGTTAGATGT GGTCATTGAA AAGAATGGCA CCATGGCTTT TGACAACGCT ATTATCGCTT ACGAGCCATT ATGGGCAGTA GGGACAGGTA AGAGTGCTAC GCCAGAGCAG GCTCAAGAAG TTCATGCGTT TATCCGCAAA CGCCTCTCTG AAGTATCTCC ATTTATCGGA GAAAATATCA GGATTTTGTA CGGTGGTAGC GTAACACCGA GTAATGCAGC AGACTTGTTT GCTCAACCTG ATGTAGACGG TGGATTGATT GGCGGTGTAA GCCTCAATGC TACCGAATTT CTCAGTTTAT GTACGATAGC GATGAGCGCA TAA
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Protein sequence | MALRRPMVAG NWKMNGSAQL AQELFNKFAT KLQDDSVEVV LCPPSIYLES VRQLLDENKE TLNGCLVRMG TQNLSQHDFG AYTGEISGQM LKDSGCRYVI IGHSERRRMY GETSNIVAEK FAAAQKHGLT PILCVGESGP AREARRTFEV IAEELDVVIE KNGTMAFDNA IIAYEPLWAV GTGKSATPEQ AQEVHAFIRK RLSEVSPFIG ENIRILYGGS VTPSNAADLF AQPDVDGGLI GGVSLNATEF LSLCTIAMSA
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