10 homologs were found in PanDaTox collection
for query gene Spea_3052 on replicon NC_009901
Organism: Shewanella pealeana ATCC 700345



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009901  Spea_3052  hypothetical protein  100 
 
 
86 aa  176  9e-44  Shewanella pealeana ATCC 700345  Bacteria  hitchhiker  0.0000703207  n/a   
 
 
-
 
NC_010506  Swoo_3553  hypothetical protein  67.57 
 
 
53 aa  59.7  0.00000001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.628788  decreased coverage  0.000000511346 
 
 
-
 
NC_009052  Sbal_3231  hypothetical protein  70.59 
 
 
67 aa  57.4  0.00000006  Shewanella baltica OS155  Bacteria  hitchhiker  0.0000172065  n/a   
 
 
-
 
NC_009997  Sbal195_3370  hypothetical protein  70.59 
 
 
67 aa  57  0.00000009  Shewanella baltica OS195  Bacteria  normal  0.0472701  hitchhiker  0.00621797 
 
 
-
 
NC_011663  Sbal223_1136  hypothetical protein  70.59 
 
 
67 aa  57  0.00000009  Shewanella baltica OS223  Bacteria  hitchhiker  0.00000000136722  unclonable  0.00000000000179401 
 
 
-
 
NC_008700  Sama_0969  hypothetical protein  62.16 
 
 
76 aa  56.6  0.0000001  Shewanella amazonensis SB2B  Bacteria  normal  0.0209011  decreased coverage  0.0001495 
 
 
-
 
NC_009092  Shew_2819  hypothetical protein  62.86 
 
 
96 aa  56.6  0.0000001  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000904904  hitchhiker  0.000041627 
 
 
-
 
NC_009665  Shew185_3234  hypothetical protein  70.59 
 
 
67 aa  56.6  0.0000001  Shewanella baltica OS185  Bacteria  normal  0.029802  n/a   
 
 
-
 
NC_009438  Sputcn32_2826  hypothetical protein  73.33 
 
 
61 aa  54.7  0.0000004  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00000926476  n/a   
 
 
-
 
NC_008345  Sfri_0998  hypothetical protein  67.86 
 
 
66 aa  51.6  0.000004  Shewanella frigidimarina NCIMB 400  Bacteria  hitchhiker  0.000724913  n/a   
 
 
-
 
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