Gene Spea_3013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_3013 
Symbol 
ID5663403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp3693835 
End bp3694554 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content46% 
IMG OID641237652 
Producthypothetical protein 
Protein accessionYP_001502865 
Protein GI157962831 
COG category[S] Function unknown 
COG ID[COG3495] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.195597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTA TGAAGAAAAT TTTGTTGTTA ACCTCGACAC TATCATTTGC TGTTCAAGCA 
AACTCTGAGG CGCTAGATTT ACAAAAGCTA GATTGGCAAG TACTAGCCCC ATCTATCAAT
GAGCAAGAGG TCAGTTTGCC TAATGTGACC GAAGCTCAAA AAAGATTGCT AGCAAGCGTT
ATTCAATATC AAAACAGTCC TGACAGCGCG GCTAGCGCCA AAGTTAAAGC CGCCCGCGAA
TCATTGACTC AACAGGGAAT CGATGTAGAT GCAGCCCTAG ATGCAAGGGC GCGCTATATG
TCGCTTGCCC AGCGCAAAGC CGAGAGTTTA AATACTGAGG TTAATGGTAA GCAGGTCAGC
ATGTCAGGCT TTGTCGTGCC GACAAAGTTT AACGGCGTCA AAGCGACAGA GTTTTTATTT
TTACCCTATG CCGGAGCCTG TATTCATATG CCGCCACCAG CGGCGAATCA AATCATTAAG
CTCCGATATC CGTCAGGATT CGAGGTTGAA AATGTGCAAT TCCCAGTAAC CGTTAGCGGC
ACTATTAACG CAGATAAGCA AACTGAGCTG GTGCAGCTGG TTGATGGCAA AATGAATGTC
ACTATGGGTT ACGCCATGGA AGCACTAACG ATTGATAAAT ACTATGGTGA TGCGATATCT
AACCCTGTCA CGGGCTTAGA ACTGCAAGAT AGCCTAGATC ATAAAGGGCA CGCTCACTAA
 
Protein sequence
MRVMKKILLL TSTLSFAVQA NSEALDLQKL DWQVLAPSIN EQEVSLPNVT EAQKRLLASV 
IQYQNSPDSA ASAKVKAARE SLTQQGIDVD AALDARARYM SLAQRKAESL NTEVNGKQVS
MSGFVVPTKF NGVKATEFLF LPYAGACIHM PPPAANQIIK LRYPSGFEVE NVQFPVTVSG
TINADKQTEL VQLVDGKMNV TMGYAMEALT IDKYYGDAIS NPVTGLELQD SLDHKGHAH