| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2961 |
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| Symbol | |
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| ID | 5663351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3624404 |
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| End bp | 3626101 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641237600 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001502813 |
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| Protein GI | 157962779 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAATAA AAATAATAAT GCGACTACTG TTGTTACTGT CGGTGTTTGT ATATTGCGAT
GTGAGTTATG CTCGCCAAGC CGCTGTGATG GAAAAAACGT TTATTTTTAG TGCCGAGGCT
GAAGATGAAG TTCCCAAAGA CTTCTTGAAG ACTATCTCTT GGATGGAAGA TAAAAAGGAG
TTGAACAGGG TATCGCTTTC TGGTGGTAAT TACTGGATGG TGTCAGCGGT GCAGGTGAAT
AACTACAACA AGCACTGGAC GGTTAATGTC AAAAATTCCA TTATTGAGTC CGTCGATTAC
TGGTTAATTG GAGAGGACGG TTCAACTCAA TATTTTCATA GTGGTTATTA CGCTCCTTAC
GAATTCTTGT TCGACTATGC CAGAAGCGTT GAGATGAGCA TAGGAGTAAA CTACTGGTTT
ATCACTCGAG TTAATAGTCG TTACTTTTCA TCCCAGCCTA AACTTCAAGT TGAAGAATAC
AAAGAGCATA AGCGTCAGTC AGATATCTAT GCCTTGTTTA TCATTCTTTG CATAGGTGGG
TTAATATTTA TCACACTCTA TAATGGCATC ATTTATGTTT CCATCCGTGA TAAAGCATTT
CTTTATTATG CTTGTTACGT ACTATGTTAT TTAACTGGCT GGGCGCTAAC TTTCCACTTA
CCGGCTCATC TGTTTGATTT TCACAATTTA GAGCTTCATC ATCTGTTTTT TATTGGGCTA
CCAATATTTA ATATCCTATT CTATATACAT TTTTTGCAGC TCCCAGAGTT GTCACCGAAA
CTTTATCGGC TAAGTTTAGG GCTTTTGTGG CTATGTATCA TCGCCCTGCC AACAAGTATG
TATTTGGTGT CCTATACGGC GATAATCGCG TCGGTGTTGA TCATGTTATG GATAGGGCTT
GCGATGTTTT GTGGCAATGT CTGCCTGTTA AAGGGCTTCC ATCCTGCACG ATATTTCCTG
CTAGCCTTTA CTTGTTTACT GTTACCCGCA GTGCTGATCT TGCCTGGAAA TATGGGACTG
ACGCCTGATT TTTTTGATAA CGCAGAACTG GCTACTTTAA TCGGCGGTGC AGCCGATGCC
TTGTTATTGT CATTTGCGTT AGCCTATAAA ATTCGCTTGC TGTCCGAGGA AAAAGAGCGT
CATATCGAAA TACTCGAAGT TGCTAGGAAA AACGCTCGCA CAGATAAGCT AACGGGTCTA
CCCAATCGTT TTGCATTTGA TGAATCTATG CTTAAGGGGT TGCCTTTCGG TGCTCAAGCC
TCTAGGCAGT TATGTTTGAC CTTAGTTTCG TTGGAGGGGT TACCGCTGCT GACTCGAAAA
CTAGGTCATA ATGAGGTCGA TAAGGTTATT TGTAGTGTAG CAGAGTCACT TAGACAGGTT
TATGAGTATG TAGACACAAG TTCAGATACT CACTCAAATT CTATGAGTGA GTTAACCAAT
ACCTATCGAA TTGCAGACAA TAGTTTTGTC GTTGTGTGTG AGGCTGATAT TTCCCATAAA
ATACAGCAGC AGGTCTCACG GCTCCAATCC GGTTATTTGA TTGACCACTA TAGCGATGTG
AGCATTCATT TTGGTGCCAG CTTTAATCGG GATGTGAATG ATAGCGGCCA ATGGTTGCGG
CAATCAGAGC ATGACTTATA CAAGAATCAA AGTGTTAAGC GCCGAGAACG ATATGTGCAA
AGCCTAAGCC ACATATAA
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| Protein sequence | MLIKIIMRLL LLLSVFVYCD VSYARQAAVM EKTFIFSAEA EDEVPKDFLK TISWMEDKKE
LNRVSLSGGN YWMVSAVQVN NYNKHWTVNV KNSIIESVDY WLIGEDGSTQ YFHSGYYAPY
EFLFDYARSV EMSIGVNYWF ITRVNSRYFS SQPKLQVEEY KEHKRQSDIY ALFIILCIGG
LIFITLYNGI IYVSIRDKAF LYYACYVLCY LTGWALTFHL PAHLFDFHNL ELHHLFFIGL
PIFNILFYIH FLQLPELSPK LYRLSLGLLW LCIIALPTSM YLVSYTAIIA SVLIMLWIGL
AMFCGNVCLL KGFHPARYFL LAFTCLLLPA VLILPGNMGL TPDFFDNAEL ATLIGGAADA
LLLSFALAYK IRLLSEEKER HIEILEVARK NARTDKLTGL PNRFAFDESM LKGLPFGAQA
SRQLCLTLVS LEGLPLLTRK LGHNEVDKVI CSVAESLRQV YEYVDTSSDT HSNSMSELTN
TYRIADNSFV VVCEADISHK IQQQVSRLQS GYLIDHYSDV SIHFGASFNR DVNDSGQWLR
QSEHDLYKNQ SVKRRERYVQ SLSHI
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