Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2961 |
Symbol | |
ID | 5663351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3624404 |
End bp | 3626101 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641237600 |
Product | diguanylate cyclase |
Protein accession | YP_001502813 |
Protein GI | 157962779 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAATAA AAATAATAAT GCGACTACTG TTGTTACTGT CGGTGTTTGT ATATTGCGAT GTGAGTTATG CTCGCCAAGC CGCTGTGATG GAAAAAACGT TTATTTTTAG TGCCGAGGCT GAAGATGAAG TTCCCAAAGA CTTCTTGAAG ACTATCTCTT GGATGGAAGA TAAAAAGGAG TTGAACAGGG TATCGCTTTC TGGTGGTAAT TACTGGATGG TGTCAGCGGT GCAGGTGAAT AACTACAACA AGCACTGGAC GGTTAATGTC AAAAATTCCA TTATTGAGTC CGTCGATTAC TGGTTAATTG GAGAGGACGG TTCAACTCAA TATTTTCATA GTGGTTATTA CGCTCCTTAC GAATTCTTGT TCGACTATGC CAGAAGCGTT GAGATGAGCA TAGGAGTAAA CTACTGGTTT ATCACTCGAG TTAATAGTCG TTACTTTTCA TCCCAGCCTA AACTTCAAGT TGAAGAATAC AAAGAGCATA AGCGTCAGTC AGATATCTAT GCCTTGTTTA TCATTCTTTG CATAGGTGGG TTAATATTTA TCACACTCTA TAATGGCATC ATTTATGTTT CCATCCGTGA TAAAGCATTT CTTTATTATG CTTGTTACGT ACTATGTTAT TTAACTGGCT GGGCGCTAAC TTTCCACTTA CCGGCTCATC TGTTTGATTT TCACAATTTA GAGCTTCATC ATCTGTTTTT TATTGGGCTA CCAATATTTA ATATCCTATT CTATATACAT TTTTTGCAGC TCCCAGAGTT GTCACCGAAA CTTTATCGGC TAAGTTTAGG GCTTTTGTGG CTATGTATCA TCGCCCTGCC AACAAGTATG TATTTGGTGT CCTATACGGC GATAATCGCG TCGGTGTTGA TCATGTTATG GATAGGGCTT GCGATGTTTT GTGGCAATGT CTGCCTGTTA AAGGGCTTCC ATCCTGCACG ATATTTCCTG CTAGCCTTTA CTTGTTTACT GTTACCCGCA GTGCTGATCT TGCCTGGAAA TATGGGACTG ACGCCTGATT TTTTTGATAA CGCAGAACTG GCTACTTTAA TCGGCGGTGC AGCCGATGCC TTGTTATTGT CATTTGCGTT AGCCTATAAA ATTCGCTTGC TGTCCGAGGA AAAAGAGCGT CATATCGAAA TACTCGAAGT TGCTAGGAAA AACGCTCGCA CAGATAAGCT AACGGGTCTA CCCAATCGTT TTGCATTTGA TGAATCTATG CTTAAGGGGT TGCCTTTCGG TGCTCAAGCC TCTAGGCAGT TATGTTTGAC CTTAGTTTCG TTGGAGGGGT TACCGCTGCT GACTCGAAAA CTAGGTCATA ATGAGGTCGA TAAGGTTATT TGTAGTGTAG CAGAGTCACT TAGACAGGTT TATGAGTATG TAGACACAAG TTCAGATACT CACTCAAATT CTATGAGTGA GTTAACCAAT ACCTATCGAA TTGCAGACAA TAGTTTTGTC GTTGTGTGTG AGGCTGATAT TTCCCATAAA ATACAGCAGC AGGTCTCACG GCTCCAATCC GGTTATTTGA TTGACCACTA TAGCGATGTG AGCATTCATT TTGGTGCCAG CTTTAATCGG GATGTGAATG ATAGCGGCCA ATGGTTGCGG CAATCAGAGC ATGACTTATA CAAGAATCAA AGTGTTAAGC GCCGAGAACG ATATGTGCAA AGCCTAAGCC ACATATAA
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Protein sequence | MLIKIIMRLL LLLSVFVYCD VSYARQAAVM EKTFIFSAEA EDEVPKDFLK TISWMEDKKE LNRVSLSGGN YWMVSAVQVN NYNKHWTVNV KNSIIESVDY WLIGEDGSTQ YFHSGYYAPY EFLFDYARSV EMSIGVNYWF ITRVNSRYFS SQPKLQVEEY KEHKRQSDIY ALFIILCIGG LIFITLYNGI IYVSIRDKAF LYYACYVLCY LTGWALTFHL PAHLFDFHNL ELHHLFFIGL PIFNILFYIH FLQLPELSPK LYRLSLGLLW LCIIALPTSM YLVSYTAIIA SVLIMLWIGL AMFCGNVCLL KGFHPARYFL LAFTCLLLPA VLILPGNMGL TPDFFDNAEL ATLIGGAADA LLLSFALAYK IRLLSEEKER HIEILEVARK NARTDKLTGL PNRFAFDESM LKGLPFGAQA SRQLCLTLVS LEGLPLLTRK LGHNEVDKVI CSVAESLRQV YEYVDTSSDT HSNSMSELTN TYRIADNSFV VVCEADISHK IQQQVSRLQS GYLIDHYSDV SIHFGASFNR DVNDSGQWLR QSEHDLYKNQ SVKRRERYVQ SLSHI
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