Gene Spea_2959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2959 
Symbol 
ID5663349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp3622066 
End bp3622743 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content46% 
IMG OID641237598 
Producthypothetical protein 
Protein accessionYP_001502811 
Protein GI157962777 
COG category[S] Function unknown 
COG ID[COG5587] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02453] conserved hypothetical protein TIGR02453 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT TTACTCCTGA GTGTTTTAAT TTCTTAAACC TACTTTCGGT TAATAACGAC 
AGAGAGTGGT TTAAAGCCAA TCAACAACAA TATGAAGATA AAGTCCGCAC CCCGGCATTA 
AAGTTTATCG AAGCCATGCA GCCGCATATT CTTGGGCTAT CGCCGCGATT AACCGCTGTG 
CCTAAAAAAG TCGGCGGCAG CATGATGCGC CCTCAACGTG ATAGTCGCTT TAGTAAAGAT 
AAGACGCCCT ATAAAACCAA TGTCGGCATT CAGTTTAGGC ATTTTCAGGG CAAAGATGTA 
CACGCCCCAG GCTTGTACCT ACACATTGCC AACGATGGCT GCTTTATTGG CGCAGGAATT 
TGGCATCCAG AATCTAAGAC CCTAAACGCC ATTAGAAGCT GCATAGATGA AAACCCCAAT 
GGCTATAAAA AAGCGCTGCG TGAATTAACA GCCCAAGGTT TTGAGATGCA AGGCAGCACG 
CTTATTCGCC CACCAAAAGG CTATGACAAA AACCATCCAA TGTTAGAGGA GCTTAAGCGC 
AAAGACTTTA TCGCCATAAA GCCGCTAAGT ATCGAGCAAG TGTGTGCACC TGAGTTTGTC 
GATGTTTGCG CCCGAGAGTT CGCCGCATGC CAGCAACTGA TGCGCTACTT GTGCTTTGCG 
TTAGATCTCG ATTACTAA
 
Protein sequence
MSEFTPECFN FLNLLSVNND REWFKANQQQ YEDKVRTPAL KFIEAMQPHI LGLSPRLTAV 
PKKVGGSMMR PQRDSRFSKD KTPYKTNVGI QFRHFQGKDV HAPGLYLHIA NDGCFIGAGI 
WHPESKTLNA IRSCIDENPN GYKKALRELT AQGFEMQGST LIRPPKGYDK NHPMLEELKR 
KDFIAIKPLS IEQVCAPEFV DVCAREFAAC QQLMRYLCFA LDLDY