| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2891 |
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| Symbol | |
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| ID | 5663282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3530330 |
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| End bp | 3531184 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237531 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001502744 |
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| Protein GI | 157962710 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA ACACTAAAAA TCCCTCTCAA AGTGAACAAC TTGATGAGAG CCTACTCGAA
CAAGACTTAT GTCAAGATGA AGAACAAGAG ATAGCGCCGC ATATCGAAGT GCTATTTGAA
GATGATGATA TTGTGGTGAT CCACAAGCCT GCAGGCTTGT TGGTGCACCG CAGTTATCTT
GCCAGACGTG AGCGATTCTT TGCTATGCAA CTGACTCGAG ATCTAGTTGG TTGTCACGTA
TTCCCGGTGC ATAGGCTAGA TAGACCGACG TCAGGTATTT TGTTGTTTGC CAAAAGCAGT
GAAATGGCTA ATGTCCTGTG TGAGCAGTTT GCTGCTCATA CGGTCGATAA GGAGTATCTA
GCGATTGTTC GTGGCAACAT GCATGAGGCG GGTACGCTAG ACTATGCCCT CAAAGAGGAG
CTTGATGAGC TAGGCGATAA AGATGTGGAT CCTAACAAGG CTGCGCAAGA TGCAGTAACT
AGCTATAAGC CATTATTGAA CAGTGAGATC CCTTTCTCTT CGGGTCGTTA TGCAACCAGT
CGTTACGCTT TAGTTCAACT TTCTCCTCAC ACTGGTCGTA AGCATCAATT AAGACGTCAT
ATGGCACATT TACGCCACCC TATTCTGGGT GATACTACTC ATGGCGACGG TAAACAGAAT
AAGTTCTTCC GTTCTCATTT TGGCATCAAT AGATTGTGGC TAATCGCCAA GAAACTGAGC
TTTAATCACC CTAGGAGCGG TGAGCGCATG AGCGTAGAGA CCGAGCTTGA GGCGGAGTGG
TTAAGTTTGT TTGAAGGTCT AGGTTGGCAT GAGGAGACAC TATCCCTGGA CGCTCAGCCG
ATTATTATAG CCTGA
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| Protein sequence | MSDNTKNPSQ SEQLDESLLE QDLCQDEEQE IAPHIEVLFE DDDIVVIHKP AGLLVHRSYL
ARRERFFAMQ LTRDLVGCHV FPVHRLDRPT SGILLFAKSS EMANVLCEQF AAHTVDKEYL
AIVRGNMHEA GTLDYALKEE LDELGDKDVD PNKAAQDAVT SYKPLLNSEI PFSSGRYATS
RYALVQLSPH TGRKHQLRRH MAHLRHPILG DTTHGDGKQN KFFRSHFGIN RLWLIAKKLS
FNHPRSGERM SVETELEAEW LSLFEGLGWH EETLSLDAQP IIIA
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