Gene Spea_2848 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_2848 
Symbol 
ID5663239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand- 
Start bp3476204 
End bp3476770 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content45% 
IMG OID641237488 
ProductLemA family protein 
Protein accessionYP_001502701 
Protein GI157962667 
COG category[S] Function unknown 
COG ID[COG1704] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0119025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGTT CAGTAATAGG CTTGATTGTT GTTGCCGTAG TGGTCGTCGC GATCATCATG 
GTGTACAACG GCATTATCGG TAAACATAAC GCTGTGGATC GCGCATGGGC GTCGGTACTG 
ACTCAAGAGC GCCAGAAGAA TAAGATTATT CCTCTGGTTG AGCAGTTAGT CGAGCAATAT 
AAACTGCACG AGTCTGAAGT ATTAACCAAG GTGACTGAGC TACGTAGCGC CATTGCTGAT 
ATGAGCGCCG GTGTTGATAC CGCAAAGCTC GCAGCAGCTG AGCAGCGCAC CAATGAGTTA 
TTGCAAGGCC TTAAAGTCAC AGTAGAAGCT TATCCAGAGC TTAAAGCATC TGATGTGTAC 
ATGAAATTGA TGGCAGAAAT TAGCGAGCAA CAAGAGCAGA TTGGTGCGGC AATTCGTATT 
TTCAACGCCA ATGTAGAAGA CTTTAACAAC GCCATTGAGA TGTTCCCTGG CTCGCTTATT 
AATAGCATCT TGGTACGTAA GCAGAAAATC GCAAGCTTTA GTGATAGTGA AGCACAAGCT 
GGGTTTGAGT ATAAACCTAA TTTATAG
 
Protein sequence
MDSSVIGLIV VAVVVVAIIM VYNGIIGKHN AVDRAWASVL TQERQKNKII PLVEQLVEQY 
KLHESEVLTK VTELRSAIAD MSAGVDTAKL AAAEQRTNEL LQGLKVTVEA YPELKASDVY 
MKLMAEISEQ QEQIGAAIRI FNANVEDFNN AIEMFPGSLI NSILVRKQKI ASFSDSEAQA 
GFEYKPNL