| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2753 |
|---|
| Symbol | |
|---|
| ID | 5663146 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3364417 |
|---|
| End bp | 3364947 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641237395 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001502608 |
|---|
| Protein GI | 157962574 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCTG GTTGCAGTAC AACAGATAGT GCAGAAGCCG AGATGGCGGC GACGCGAACG
ACTATGGTGA CTACTGGAGA TCTTACGATG CTGAGCCGAT CCTCAAAAGC CTTTGCTTGG
CACCCGACCA TGTTTGCTGT TCACGCTAGT GATGAGGTCG ACGATCAAGC GGTGATCAAG
CATATGCAAG TCGCTATTAC TCAGGCGATG CAGGCAAAGG GCTATCATTT AGCCAGTGCC
CACGAGGCGC CGAGTGTGTT AGTCGGTTTT GGGTTGGCAC TAGAGTCTGA GATGAGTGAT
AAAGAGATCT TAAAAAGAGC TGGTTTAGTT GCAGGCTTAT CTACCGTAGG TGTCGATGAC
GAATATGAAA AGGGATCGGT ATTAGTGGCA CTGTTTTCTC CCCATAACCC TATACCAGTA
TGGCGAGTAT TAGCTCAAGG TTTTACGGAT TCAGATAATA CTCTAGAGCA AAGGGAGCAA
CGTTTCGAGC GTTTGTTGTC GACTATGCTA CAGTCAGTTC CTGCGGTTTA G
|
|---|
| Protein sequence | MLAGCSTTDS AEAEMAATRT TMVTTGDLTM LSRSSKAFAW HPTMFAVHAS DEVDDQAVIK
HMQVAITQAM QAKGYHLASA HEAPSVLVGF GLALESEMSD KEILKRAGLV AGLSTVGVDD
EYEKGSVLVA LFSPHNPIPV WRVLAQGFTD SDNTLEQREQ RFERLLSTML QSVPAV
|
|---|
| |