Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2747 |
Symbol | |
ID | 5663140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 3357452 |
End bp | 3358237 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641237389 |
Product | diguanylate cyclase |
Protein accession | YP_001502602 |
Protein GI | 157962568 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.86983 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGATTT CGTTGCGATC AGCTAGGCGT TATTTAGTAC AAAGAATGAG ACATATAATT CAAAACCTTG GACGGCTAAA AGTCGTCCTC CTTATTACCG CGCTGTCGGT TTCTTTCTCA GTTTTCATCA CTTTTTTGGC TTTTTCTCTT CGTCAGACAG GTGCCGTTTA CAACATTGCG TTTTTTTTAG CCACGTTTAT TCCCTTGACT ATTGCACCTA TAGTTTCCTG GCCACTAATA AGCTTGCTTA TGAAAGTTGA CTCTCTTGAA AAAGAGATGA GGCTGTTGGC ATCGCTAGAT CCTTTGACAG AACTATTAAA TCGGCGGGCT TTTTTCCGTG ATGCCGAATT ATATATTCAT CGTGCTAAGC AAGAGGGGAG GATGTTGTCT GTGATCGCAT TGGATTTGGA TAAATTTAAG GCGATAAATG ATTGCTATGG ACATAGCGCT GGTGATGCAG TGCTAAGGCA CTTTTCTACA ACGATAAGAG CTAACTGTCG AACGTCAGAT TTAATGGGTC GTTTAGGTGG TGAGGAGTTT GCTCTGTTAT TGCCAAACAC GTCTGCCTCG GCCGCTTATG CGCTTGCAGA AAGGTTACAT CAGGCTCTTA GGTTAACAGC GATTCAGTAC GGTCACTCAA CAATGCGTTA TACAGTAAGT ATTGGTGTTA TATCAGTGGT GCCTCAAAAA ACTGACAACA TTGAAGCTCT GCTCAATAAA GCCGATCGTT CGCTCTATCT TGCAAAAGAA ACTGGCAGAA ACTGTACCGT GGTATTCGAT AGCTAA
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Protein sequence | MPISLRSARR YLVQRMRHII QNLGRLKVVL LITALSVSFS VFITFLAFSL RQTGAVYNIA FFLATFIPLT IAPIVSWPLI SLLMKVDSLE KEMRLLASLD PLTELLNRRA FFRDAELYIH RAKQEGRMLS VIALDLDKFK AINDCYGHSA GDAVLRHFST TIRANCRTSD LMGRLGGEEF ALLLPNTSAS AAYALAERLH QALRLTAIQY GHSTMRYTVS IGVISVVPQK TDNIEALLNK ADRSLYLAKE TGRNCTVVFD S
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