| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2681 |
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| Symbol | clpP |
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| ID | 5663074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 3267599 |
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| End bp | 3268210 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237320 |
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| Product | ATP-dependent Clp protease proteolytic subunit |
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| Protein accession | YP_001502536 |
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| Protein GI | 157962502 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000000377724 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCACAAAG CGCCAGAATC AGTACTTAAC GCACTCGTTC CTATGGTTGT TGAACAAACA
GCTAAAGGTG AACGTTCATA TGATATTTAT TCTCGCCTTT TGAAAGAGCG AGTGATCTTT
CTTGTTGGCC AAGTTGAAGA ACATATGGCT AACCTTATCG TTGCTCAGTT ACTGTTTTTG
GAATCAGAGA GCCCAGATAA GGATATCTAC CTATACATCA ACTCGCCAGG CGGCAGCGTA
ACTGCAGGTA TGGCGATTTA TGACACAATG CAGTTTATTA AGCCAAACGT GAGCACTGTG
TGTATTGGTC AAGCGGCGAG CATGGGCGCA TTTTTGTTAG CAGGCGGTGC AGAAGGCAAA
CGTCATTGCT TACCGAACTC TAGAGTGATG ATCCATCAGC CACTAGGCGG CTTCCAAGGA
CAGGCGTCGG ATATTGCTAT TCATGCTCAA GAGATCTTGG GTATTAAGAA TAAGCTAAAC
ACCATGTTAG CTGAGCATAC TGGTCAGCCT CTTGAAGTGA TTGAACGTGA TACAGACCGT
GATAACTTCA TGAGCGCGAC AGAAGCCGCT GAATATGGTT TAGTCGATTC AGTGATAGCA
AAACGAGGCT GA
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| Protein sequence | MHKAPESVLN ALVPMVVEQT AKGERSYDIY SRLLKERVIF LVGQVEEHMA NLIVAQLLFL
ESESPDKDIY LYINSPGGSV TAGMAIYDTM QFIKPNVSTV CIGQAASMGA FLLAGGAEGK
RHCLPNSRVM IHQPLGGFQG QASDIAIHAQ EILGIKNKLN TMLAEHTGQP LEVIERDTDR
DNFMSATEAA EYGLVDSVIA KRG
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