| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2660 |
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| Symbol | |
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| ID | 5663053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3241610 |
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| End bp | 3242524 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641237298 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001502515 |
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| Protein GI | 157962481 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCCCTC TAATCTATGA CGCCAGCTAC TCCAAGCTGG CGTTACCTCC TCTTCATCGC
TTTCCAATTA GTAAATACCG CGCCTTATAT GAATACCTGC TCGAGCAAGG TATTGCTGAA
CAACCGCAAT TTATCGCCCC CACAAAAGCG AGCATCGAAT ATCTCACAGC GTTGCACGAC
CAAAGCTATG TGAAAGACTT TATTTCAGGT GAACTAGACA GCAAATTAAT GCGCCGAATT
GGTTTCCCGT GGAGCAAAGC GTTAGTCGAA CGAACCTTAT ATTCGGTAGC AGGCACCGCA
CTGACCTGTG AGCAAGCGAT AACCCATGGC TGCGCCATTC ATTTAAGCGG CGGTTACCAT
CATGCCCACC AGCAGTTTGG CAGTGGCTAC TGTATTTTTA ACGATCTCGT ACTCGCGGCG
GTGAATAGCC AACAAATTGA TGATATTGAA ACTGTGCTCA TTTTCGACTG CGATGTTCAT
CAAGGTGACG GGACAGCAAC GATTGCACAA TCATTAAATC ATGTCATCAC TTGCTCTATT
CATTGCCATC AAAACTTCCC AGCACGAAAA CAGCAATCAG ATTACGATAT CGAGCTTGAT
AAGGGCACGT CAGATATTGA GTACGTAGAG ACTGTAGAGC AGACACTTGC CTACCTTATT
CGACTGCATA AGCCAGACCT GATTATTTAC GATGCTGGTG TGGATATTCA TAGTGATGAC
AACTTGGGGT ATTTAAATAT CAGCACAGAT GGGATCTACG CCAGAGACTT AGAAGTCATC
CATCAAGCTA AAACAGCACA AATACCCATT GCGTGTGTTA TAGGAGGGGG ATACAGTAGA
GATTCGACAC AGCTAAGTGT TCGACATAGC CAAGTGTTTA TTGCGGCAAA TAATTTTTGG
CAGTCAACAA GTTAA
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| Protein sequence | MVPLIYDASY SKLALPPLHR FPISKYRALY EYLLEQGIAE QPQFIAPTKA SIEYLTALHD
QSYVKDFISG ELDSKLMRRI GFPWSKALVE RTLYSVAGTA LTCEQAITHG CAIHLSGGYH
HAHQQFGSGY CIFNDLVLAA VNSQQIDDIE TVLIFDCDVH QGDGTATIAQ SLNHVITCSI
HCHQNFPARK QQSDYDIELD KGTSDIEYVE TVEQTLAYLI RLHKPDLIIY DAGVDIHSDD
NLGYLNISTD GIYARDLEVI HQAKTAQIPI ACVIGGGYSR DSTQLSVRHS QVFIAANNFW
QSTS
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