| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2608 |
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| Symbol | |
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| ID | 5663001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 3176029 |
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| End bp | 3177480 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641237246 |
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| Product | sodium/proline symporter |
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| Protein accession | YP_001502463 |
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| Protein GI | 157962429 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02121] sodium/proline symporter |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0498264 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATTG AATTACCTGT TTTAATTACT TTTATCGCCT ATCTCTCTTT AATGATGGGC
ATAGGCTTAT GGGCTTATAA AGCAACAGAC TCTGTAGACG ATTACATTCT AGGTGGCCGT
GGTATGGGGC CTGCGGTTAC TGCACTCAGT GTGGGTGCCT CAGATATGTC GGGCTGGTTA
CTTTTAGGTT TACCCGGAGC CGTATACCTA GGCGGGTTAG GCGAAGCTTG GATTGGCATA
GGTCTTGTCT TTGGCGCTTG GCTTAACTGG CTATTTGTCG CTAAACGTTT ACGTGTTTAT
ACCCAATTTA CTGATAATGC ACTGACACTT CCCGACTTCT TCGAGAAACG TTTTGAAGAT
AATAAAGGCC TGCTAAAGTT AGTTTCAGCT GTGACCATCT TAGTCTTCTT CACCTTTTAT
GCCTCCTCTG GCATGGTAGG TGGTGCGATT TTATTTGAAA AAGTATTCGG TCTAGATTAC
ACCTTGGCTT TGATCATTGG CTCTACCATT ATCGTGGCCT ATACCTTCGT TGGTGGTTTC
TTTGCCGTTA GTTGGACCGA CTTTTTCCAA GGCTGCCTGA TGCTTATTGC ACTGTTAATT
GTCCCTGTGG CTATTTTTAG TCAGCCAGAG ACACAAGCAG GCTTGGAAAA CATCGACCCA
GCAATGCTAT CTATGTTCAA TGAAAATACC ACCTTTATTG GCTTCATATC GCTACTAGCA
TGGGGACTAG GCTATTTTGG TCAGCCGCAT ATTCTGTCTC GCTTTATGGC TATAGCCTCA
CCTGACGATA TTCCGGTTTC ACGCCGCATC GCCATGGGTT GGATGCTACT AGCCCTTGTC
GGTGCGCTGG CAACAGGTAT TGCCGGTAGC CTCTACTTTG CAGCTGAGCC ACTATCAAAC
CCTGAAACCG TGTTCATTCA CTTAGCCCAT GCAGCATTTA ATCCGTGGAT TGGTGGTTTA
CTTATCGCAG CTATCTTGTC GGCAATTATG AGTACCATCG ATTCGCAGCT TTTAGTCTGT
TCGAGTGTGA TCACCGAAGA TTTCTATAAG AAGTGGTTAC GTCCACAGGC GACAAGTAAA
GAATTGATGC TTGTCGGCCG TATTGGTGTA TTGGCGATTG CCATCATTGC GGGTGTTGTT
GCCCTTAATC CAGAAAGCAG CGTACTAGGT TTAGTCAGCT ATGCTTGGGC TGGCTTTGGT
GCAGCTTTCG GTCCTGTCGT GTTGTTATCT CTATTTTGGC GTGGTTACAG CCGCAATGGT
GCAGTCGCGA CCATTATTGT TGGTGCACTG ACAGTTGTGG TTTGGAAGCA ACTTTCAGGT
CATATTTTTG ACATCTATGA AATCCTTCCA GGCTTCATTC TAGCCAGCCT AGCCGGTGTG
GTTATCAGCA AGATGCAAAG CCCATCAGAG ACAATTAAAC AGCAGTTCGA TAGCTTCGAA
GCCAAGCTAT AG
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| Protein sequence | MTIELPVLIT FIAYLSLMMG IGLWAYKATD SVDDYILGGR GMGPAVTALS VGASDMSGWL
LLGLPGAVYL GGLGEAWIGI GLVFGAWLNW LFVAKRLRVY TQFTDNALTL PDFFEKRFED
NKGLLKLVSA VTILVFFTFY ASSGMVGGAI LFEKVFGLDY TLALIIGSTI IVAYTFVGGF
FAVSWTDFFQ GCLMLIALLI VPVAIFSQPE TQAGLENIDP AMLSMFNENT TFIGFISLLA
WGLGYFGQPH ILSRFMAIAS PDDIPVSRRI AMGWMLLALV GALATGIAGS LYFAAEPLSN
PETVFIHLAH AAFNPWIGGL LIAAILSAIM STIDSQLLVC SSVITEDFYK KWLRPQATSK
ELMLVGRIGV LAIAIIAGVV ALNPESSVLG LVSYAWAGFG AAFGPVVLLS LFWRGYSRNG
AVATIIVGAL TVVVWKQLSG HIFDIYEILP GFILASLAGV VISKMQSPSE TIKQQFDSFE
AKL
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