| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2489 |
|---|
| Symbol | |
|---|
| ID | 5662882 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 3035681 |
|---|
| End bp | 3036556 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641237115 |
|---|
| Product | 6-phosphogluconate dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001502344 |
|---|
| Protein GI | 157962310 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.924028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAAAG TTGCATTTAT TGGTTTGGGC GTGATGGGTT ACCCCATGGC CGGGCATCTT
GTTAAACATG GGCATCAAGT CACGGTTTAT AACCGCACAG AGGCGAAAGC TCAAGCTTGG
GCAAAAGAGC ATGGCGGCGA ATATCAACTC ACTCCAAGAG CGGCGGCCGA AGGACAAGAG
ATTGTTTTTG TATGTGTCGG AAATGATGAC GATTTACGTC AGGTAACCTT AGGCGATACC
GGTGCTTTGG CTGGTATGGA CTCTGAAAGT ATTTTAGTTG ATCACACTAC AGCTTCTGCC
GATGTTGCCC GAGAAATTAA CGCGGTAGCG CTGTCATTAG ATATTGGTTT TATGGACGCT
CCTGTATCAG GCGGACAAGC TGGCGCTGAA AACGGTGTCT TGACTGTGAT GGCTGGCGGC
GAACAATCAA CATTCGATAC GGCAAAGCCT GTCATTGACA GTTATGCTCG CTGCGTAGAG
TTGCTAGGTG AGGTTGGAGC TGGACAACTG ACTAAGATGG TTAACCAAAT TTGTATCGCT
GGTGTGGTCC AAGGTCTAGC TGAAGGCCTG CATTTTGCTC GAAGCGCAGG CTTAGATGGT
GAAAAGGTCG TCGAAGTGAT CAGTAAAGGA GCGGCACAAT CCTGGCAGAT GGAAAACCGT
TATCAAACCA TGTGGCAGGG CGAGTATAAC CTTGGTTTTG CAGTTGATTG GATGCGTAAA
GACTTAGGAA TTGCGCTCAC TGAAGCGCGC CGCAACGGCT CTCACTTGCC GTTAACGGCT
TTAGTCGATC AATTTTATTC AGAAGTGCAG GGTCTTGGTG GTTCTCGTTG GGATACATCG
AGTCTTTTAG CAAAACTGGA AAAGAATCGT GGTTAG
|
|---|
| Protein sequence | MAKVAFIGLG VMGYPMAGHL VKHGHQVTVY NRTEAKAQAW AKEHGGEYQL TPRAAAEGQE
IVFVCVGNDD DLRQVTLGDT GALAGMDSES ILVDHTTASA DVAREINAVA LSLDIGFMDA
PVSGGQAGAE NGVLTVMAGG EQSTFDTAKP VIDSYARCVE LLGEVGAGQL TKMVNQICIA
GVVQGLAEGL HFARSAGLDG EKVVEVISKG AAQSWQMENR YQTMWQGEYN LGFAVDWMRK
DLGIALTEAR RNGSHLPLTA LVDQFYSEVQ GLGGSRWDTS SLLAKLEKNR G
|
|---|
| |