| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2418 |
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| Symbol | |
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| ID | 5662811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2948943 |
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| End bp | 2951012 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641237044 |
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| Product | transglutaminase domain-containing protein |
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| Protein accession | YP_001502273 |
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| Protein GI | 157962239 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.478635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAGA AAGAGCGCCA GAGTATTTCC CGCCATACCT TGATGTGGCT ACTACTTGCC
AATATTGCCA TTTTATCTCC GCTCTATGAG CAGGTCACGC TGTGGTCACT GGCAATTTGC
ACTATCTGCA TCTTCTGGCG AATTGGCATC TATCTAGGCA GAGTCGCTAA ACCGCCTAAA
TGGCTGGTGA CTAGCTTAGC CTTTGCCGCG GCCGCAACTC TGGCAATGGT GGCTGGCCAA
ATTGGCGTGC TTACCGCCAT GGTCAACCTG CTTATTTTAG GTTATGCACT CAAATACATA
GAGATGCGGA ATCGCCGAGA TGTACGCGCC GTCGTGTTAG CGGGGTATTT TCTAATTGCG
TTTACCTTTA TTCACCAGCA AAGCCTGCTC TCTAGCCTAC ATCTCGTGAT TGTTACCATG
ATTAATACCT GCGTGTTGAT CAGCCTCTAT CACGATGAAG GTAACTTCAA ATACGCGGCA
AAGTTAGGCG GTAAAATCAT CCTACAAAGT ATCCCCTTGG CAGTTATCTT ATTTCTTGTT
TTACCCCGAC TGCCTCCGCT GTGGATGGTG CCCCCACAAA ATGGCGCCCA AACAGGGCTT
TCAGATAAAG TGAGCTTTGG TGATATTGGC CAGTTAACCC GCTCCAGTGC TTTAGCTTTT
AGAGCTACTT TTACTGGTAA TGCACCAAGT AACGACAAAC TTTATTGGCG CGCCATTGTA
CTAGAAGACT ATAACGGCAA AGATTGGACT CAAAACCCAA GTATTATCGA GGCGCAGTCA
TCGCCTAATA GAACCAGTCC GAGTAACAGG CCTTTTTCAA GTAACGAGCG GACTCGAGTC
CAAGCAAATG TATCGACAAT CGATTACCAA ATAATCGCCG AGCAGAGCGC CCAGCACTGG
CTATTTGGTT TAGATGTCGC AACCAGCCAA GATCGCGGCA TAAAACGCCT AGCCGATTAC
AGCCTCTATG CCACTCGCCC CATAGATCAG AGACGCCTAT ATCAAGTCAC CAGCTTTAAC
GAATCGATAA TGGACAGCCA GCTCAGTGAC AGCAGTAAAA CAGTTAACCT CACGCTACCA
ACAGGGAGTA ACCCAAAAAC CCAAGCCTTG GCGGCGCAGT TTGCCACTCA CTATCCCTCT
GCTGAGCAAA GGCTTAACGC CATGATGCAG TACTTCGCTC AGCAGCCCTA TTATTACACC
TTACAACCTC CTAGAGTCGG TAAACAGCAA ATCGATGATT TCCTGATTGA GAATAAGGCG
GGATTTTGCG TTCATTACGC CAGTGCATTC GCCTTTATGG CGCGCGCAAC GGGGATCCCT
GCTCGGCTCG TCACGGGTTA TCAAGGGGCG GAGTTCAATC CAAGTGCTGG GTATTACAGT
ATCTACCAAT ATATGGCTCA CGCCTGGGTT GAAGCATGGC TGCCAAATCG AGGCTGGGTA
CGCTTCGATC CCACCGCAAT GATCGCGCCG GAACGGGTCG AGCAAGGATT CGATGCGTTT
TTTGACCCAG AATCCACCTA CCTGATGGAC AATCCTTTTA GTGCGCTTGC CTATCGTGAT
AACCCCTTTA TAAACCAGAT GCGAATGCAA CTTGCCAGCG TCGACTATTT TTGGAGTGTT
TGGGTTCTCG GCTTCAATGA TCAAAAGCAA CAAAGAGTAT TGGAGGAGAT CTTAGGCGAA
GTGACCCAAA CTAAACTCAC CATATTTATC CTTATTAGCC TTTGTGTCAT AGGCTTGGCC
ATCGCCTATA GCGCAGGGCT GGTGCAGTTT CACCGTTCAA GTGATAAGCA CCTTAATGCC
TATTACTCTG TGTGCAAAAT GCTACGTCAA AGAGGGCTTG CTAGAGCCCA CCACGAAGGC
CCACTCGATT ACAATCAGCG GGTGGCAGCG GCCTTTCCTG ACATAGCCGA AGACTTTAAC
AAGTTAACCC ACTACTTCAT CACCATTCAG TATCAAAACC TCAGTAAGCG CAGCCATAAA
AGCTTCTCTC GATTACTTAT CAAGCAATCG AGATGGCTAA AAATCAATAT CGTTAAACAG
AGATTGGCAC TTAATAAAAC AAACACATAG
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| Protein sequence | MTQKERQSIS RHTLMWLLLA NIAILSPLYE QVTLWSLAIC TICIFWRIGI YLGRVAKPPK
WLVTSLAFAA AATLAMVAGQ IGVLTAMVNL LILGYALKYI EMRNRRDVRA VVLAGYFLIA
FTFIHQQSLL SSLHLVIVTM INTCVLISLY HDEGNFKYAA KLGGKIILQS IPLAVILFLV
LPRLPPLWMV PPQNGAQTGL SDKVSFGDIG QLTRSSALAF RATFTGNAPS NDKLYWRAIV
LEDYNGKDWT QNPSIIEAQS SPNRTSPSNR PFSSNERTRV QANVSTIDYQ IIAEQSAQHW
LFGLDVATSQ DRGIKRLADY SLYATRPIDQ RRLYQVTSFN ESIMDSQLSD SSKTVNLTLP
TGSNPKTQAL AAQFATHYPS AEQRLNAMMQ YFAQQPYYYT LQPPRVGKQQ IDDFLIENKA
GFCVHYASAF AFMARATGIP ARLVTGYQGA EFNPSAGYYS IYQYMAHAWV EAWLPNRGWV
RFDPTAMIAP ERVEQGFDAF FDPESTYLMD NPFSALAYRD NPFINQMRMQ LASVDYFWSV
WVLGFNDQKQ QRVLEEILGE VTQTKLTIFI LISLCVIGLA IAYSAGLVQF HRSSDKHLNA
YYSVCKMLRQ RGLARAHHEG PLDYNQRVAA AFPDIAEDFN KLTHYFITIQ YQNLSKRSHK
SFSRLLIKQS RWLKINIVKQ RLALNKTNT
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