Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2397 |
Symbol | |
ID | 5662790 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 2921392 |
End bp | 2922684 |
Gene Length | 1293 bp |
Protein Length | 430 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641237019 |
Product | putative serine transporter |
Protein accession | YP_001502252 |
Protein GI | 157962218 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00814] serine transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTCTG TAATTAACAA AACTGAAAAT ACCTCGGCAC AACTCAAGGT AAAATCAAGC TGGAACAAGA GCGATACTCT ATGGGTATTG GGGCTTTATG GTACGGCAGT GGGGGCTGGC ACCCTTTTCC TGCCAATTAA TGCGGCGCAA GGTGGCTTGG TCCCGCTCAT TCTTATGGCT CTACTGGCAC TGCCAATGAC CTTCTTCGCT CATCGCGGCT TAACACGTTT TGTGTTATCG GGATCAAACC CAGAAGCAGG GATCACCGAA GTGGTAGAGG AGCATTTTGG TGTAGGCATG GGTAAGGTCA TCACCTTACT CTATTTCTTT GCTATTTACC CGATTTTACT CGTCTACAGT GTTGCACTTA CCAATACTGT TGAAAGCTTT ATGCAACATC AGCTGGGCAT GACTCCGCCT AACCGTGCAA CATTGGCCTT AATCTTGATT ATTGGCTTGA TTGCCGTAGT TCGTTTAGGT GAACAGTTAA TTATCAAAGC GATGAGTATA CTGGTTTTCC CGTTCGTTGC CGTGCTTCTG CTGCTCTCTG TTTACCTGAT CCCTTACTGG AACACGTCAA TATTTAGCAA TGTGATGCCT GCAGAAGGTG GAATAAGTAC CATTTTAATG GCTTTGTGGT TGATACTGCC TGTGATGGTA TTTTCATTTA ACCACTCTCC GGTTATCTCC TCCTTTGCGG TCGATCGTAG AAAATTTCAC GGTGATGATG CTGAAAAACA GTGTTCACGG ATCTTAGCTT TTAGCCATAT TCTTATGGTT GTAACAGTGA TGTTTTTCGT GTTTAGTTGT GTGTTTAGCC TATCGCCTGC CAATCTAGCT GAGGCTAAAG CGCAAAATGT TTCGATATTA ACTTATCTAG CGAACCATTT TGATACGCCG ATTATCGCTT ATGTTGCGCC AATTGTTGCG ATCATCGCTA TCACTAAGTC ATTCTTTGGC CACTATATCG GGGCGAGTGA AGGCTTTAAT GGTTTAATCA TCAAGGCTGC ACGCGGTAAG GGCAAAGAGG TCAACCCTGT TACTCTGAAT CGTGTTACTG CAGGTTTTAT GCTACTGACC ACTTGGGCTG TAGCAACTAT CAACCCCAAT ATTTTGGGAA TGATTGAAAG CTTAGGTGGA CCAATCATCG CTCTGCTGTT GTTTATCATG CCTATGTACG CCATCATGAA AGTACCAGCG ATGAAGCAAT ACTCAGGTAC CATCAGTAAT GTTTTTGTAG TGATTATCGG ATTAGTTTCA ATCTCGGCAA TCTTCTATTC ATTGGTACAG TAA
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Protein sequence | MDSVINKTEN TSAQLKVKSS WNKSDTLWVL GLYGTAVGAG TLFLPINAAQ GGLVPLILMA LLALPMTFFA HRGLTRFVLS GSNPEAGITE VVEEHFGVGM GKVITLLYFF AIYPILLVYS VALTNTVESF MQHQLGMTPP NRATLALILI IGLIAVVRLG EQLIIKAMSI LVFPFVAVLL LLSVYLIPYW NTSIFSNVMP AEGGISTILM ALWLILPVMV FSFNHSPVIS SFAVDRRKFH GDDAEKQCSR ILAFSHILMV VTVMFFVFSC VFSLSPANLA EAKAQNVSIL TYLANHFDTP IIAYVAPIVA IIAITKSFFG HYIGASEGFN GLIIKAARGK GKEVNPVTLN RVTAGFMLLT TWAVATINPN ILGMIESLGG PIIALLLFIM PMYAIMKVPA MKQYSGTISN VFVVIIGLVS ISAIFYSLVQ
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