| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2361 |
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| Symbol | |
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| ID | 5662754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2877064 |
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| End bp | 2879673 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641236983 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_001502216 |
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| Protein GI | 157962182 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0791716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAGAC CATCTAAATT GGCCTCAGCG ATCAAGTTCG GTTTAATCGC TTCGGTTTCT
ACGACAGCCT TTACCGTGTC AAATACAGCT TTCGCAGAAG AAGTCGGTGC CGATGTAGAA
CGCATTGCTG TTACCGGCTC CCGCATTCAG CGTACCGATA TGGAAACGGC TTCGCCAGTG
ACTGTTATCG ACGCTAGCGC AATTAAAGCT TCTGGCGCGA CTTCTATTGA TGAAGTGCTA
CAGAAAATGA CCGCTACAGG CGGCGCCATG ACAAATCCTG GCGTTAACAA CGGCTCACAA
GGTGGAGCTT CAATTAACTT ACGTGGTTTA GGCTCACAAA GAACACTTGT TCTAGTTAAC
AACCGTCGTA TGGTTAACTC TGGTACTGGT GCTGCTTCTA CGGTAGATTT AAATACAATT
CCAGTATCAA TGATTAAGCG TGTTGAAGTA CTAAAAGATG GTGCATCTTC TGTGTACGGT
TCAGATGCGG TTGCTGGTGT AGTAAACATT ATTTTAAAAG ACGATTTTGA AGGTTTAGAG
CTAAATGTTC AAAGCGGTAT CTCTGGTCAA GGTGATGCTG AAGAGACTAG CTTTGATTTA
ACCACTGGTG GCAACTTTGA TGGCGGTAAC GTTGTCATGG GTATTCAATA CATGAAGCGT
GGCTCAGCAA GCCAAGCCGA TCGTGGTTTT TCCGAATGTC CTTTAACAGA AAGTGGCGGC
GAGTTGGTTT GTGCGGGTAG TGTTTACTCA GAGAATGGTC ACCTTTATGG ACCAGATGGA
GACTACCAAG GCAACCCTGA TGGCAGCTGG GACGAATATA ATCATGTAGA AGATGCATAT
AACTATTCTG CGGATAGCTT CTTATACACG CCTATGGAAC GCTTAAACTT TACAGCGCTG
GCGAACTTTG ACTTAACTGA CGATACAACT TTGTTTACTG AAACTATGTA TTCAAAGCGT
TGGTCAGAAC AGCAAATGGC ACCGCAACCT ATCTATACAG AGTTTAAGTA TACTGAAGCT
ATGGGAGATA GCTTACTAGA GCATGGCATC AATTACGGAG ACGATCTTGG GTATGCTCGC
CGTTTGACTG AAGTGGGACC ACGTGAATTC AGCCAAGTTG TCGATACTGC GCGTGTAGTT
GTTGGCCTAG AAGGTATGCT TGATAACGGT TGGACATGGG ACACATCAGT GAACTACGGT
CGTAATGACT CGGTTGACCG TCTTGCTAAC TTGGTCAACA TGGGCTCCCT AAATAAAGAT
ATCTCAGAAG GTAACTTCAA CCCATTAGAC CAAACATCAT GGTCAAGTGA CAATATGGAC
GGTTACACTT ACACCGAGCA AAACACTGGT GGTAGTGAAA TGTTCATCGT ATCGGGTAAC
CTTTCTGGTG AGGTGATGGA ATTACCTGCT GGTTACTTAG GCTTTGCATC GGGTATCGAG
CACCGTAAAG AGAAAGCTTG GTTCATTCCT GATTCGCTAA CCGCTCAAGG TCTAGCAAAC
GATCCTAAAG TTGACCCAAC TGAAGGTGAG TACGATGTAA ATGAAGCTTA CTTAGAATTA
GCGATTCCAT TGCTAGCAGA TCTTCCTCTT GCTCAGCAAG TTGACTTAAG TGCGGCAGTA
CGTTACTTCG ATTACAGCAC ATTTGGTAGC GATAGCACTT GGAAGCTTGG TTTAACTTGG
AAAATGACTG ATGACTTGAT GCTACGAAGT GTTGCGTCTA CAGCCTTTAG AGCACCATCA
GTTGATGAAT TGTATTCAGG AAGCGCTACT TCATTTGATA AGATCACTCA CCCTGTAACT
GGTGAGAAGA GCTACCAAGC TGAAGTGACT CGTGGTGGTA ACGAAAACCT TACTCCAGAA
GAAGCTGAAA CCTTCACTGT AGGTTTTGTA TATTCGCCTA GTTACTTAGA TGGATTCTCT
GTAACAGCTG ATTACTACGA TATTTCAATC ACCAACTCAA TCGCGTTAGT TGATTCAAAC
TACATCGCAG AGCAGTGTAT GAATAGTTCT GGTGAGCAAA TCAATACAGA CACCGCGCTT
TGTCAATCGG CTAATATTAC GTATGATCCA TTGAGCGGTA AAATTAAATT TAACAATCAG
CTACAAAACA TTGGTGCAGA AGATACTTCA GGTATTGACG TGAACCTAGC CTATACATTT
GAAGTGTTGG GCTTAGATTG GAGAACCGGT CTAGATACGA CTATTCTGCT TGAGAACGTG
TCTGAAATCT CTGGTCAATC TATTGATTAT GCCGGCTATA TCACATCGGG AATGGGTAGT
TTTGCCAAGG TTAAGAGTAA CTTTGACTTA GGCGTACAAG GTGCAGATTG GTCTGCTAAC
TATCAGGCTC GTTATATCTC AGGTATGGAT AGCTATGACT GTCAAGCGGC AGATGCAAGC
TGTTTAGCTC CAACAGTTGG AAGTGTTGTT TATCACGATA TTTCTGGCTC ATATTACTTC
AATAACGGGC TTCAATTGTC ATTAGGTGTT AACAACCTAT TTGATAAAGA ACCTCCATAT
TACTCTGGTA ATAATGACGC TAACACCGAT CCGTACACTT ATGACACGCT TGGACGTTAT
TTCTACCTTC AAGCAAGTTT CAAAATCTAA
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| Protein sequence | MNRPSKLASA IKFGLIASVS TTAFTVSNTA FAEEVGADVE RIAVTGSRIQ RTDMETASPV
TVIDASAIKA SGATSIDEVL QKMTATGGAM TNPGVNNGSQ GGASINLRGL GSQRTLVLVN
NRRMVNSGTG AASTVDLNTI PVSMIKRVEV LKDGASSVYG SDAVAGVVNI ILKDDFEGLE
LNVQSGISGQ GDAEETSFDL TTGGNFDGGN VVMGIQYMKR GSASQADRGF SECPLTESGG
ELVCAGSVYS ENGHLYGPDG DYQGNPDGSW DEYNHVEDAY NYSADSFLYT PMERLNFTAL
ANFDLTDDTT LFTETMYSKR WSEQQMAPQP IYTEFKYTEA MGDSLLEHGI NYGDDLGYAR
RLTEVGPREF SQVVDTARVV VGLEGMLDNG WTWDTSVNYG RNDSVDRLAN LVNMGSLNKD
ISEGNFNPLD QTSWSSDNMD GYTYTEQNTG GSEMFIVSGN LSGEVMELPA GYLGFASGIE
HRKEKAWFIP DSLTAQGLAN DPKVDPTEGE YDVNEAYLEL AIPLLADLPL AQQVDLSAAV
RYFDYSTFGS DSTWKLGLTW KMTDDLMLRS VASTAFRAPS VDELYSGSAT SFDKITHPVT
GEKSYQAEVT RGGNENLTPE EAETFTVGFV YSPSYLDGFS VTADYYDISI TNSIALVDSN
YIAEQCMNSS GEQINTDTAL CQSANITYDP LSGKIKFNNQ LQNIGAEDTS GIDVNLAYTF
EVLGLDWRTG LDTTILLENV SEISGQSIDY AGYITSGMGS FAKVKSNFDL GVQGADWSAN
YQARYISGMD SYDCQAADAS CLAPTVGSVV YHDISGSYYF NNGLQLSLGV NNLFDKEPPY
YSGNNDANTD PYTYDTLGRY FYLQASFKI
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