| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2355 |
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| Symbol | |
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| ID | 5662748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 2870373 |
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| End bp | 2872850 |
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| Gene Length | 2478 bp |
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| Protein Length | 825 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641236977 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_001502210 |
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| Protein GI | 157962176 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAACTT TATTAGAGCA AATTGATAAA GGGACGCTTT GGCGCTCACA TGGTGGTGTT
CATCCTCCAG AATTAAAAAA TCTATCAAAC AAAACGACGA TTTCAGAGTT ACCACTCGCG
AGTCAATTCG TTTTACCACT TACCCAAGTT GGCGACAGCG CCCTACTCAC GGTTAAGGTT
GGCGATAGAG TGCTAAAAGG TCAGAGCCTG ACATCGGGTA CTAGCTTTGC TTATAGCCCT
GTGCATGCAC CTACGTCCGG TGTTATCAGC CAAATTCAGC CTATGCCAAG CAATCACCCT
TCTGGCATTG CGGTATTAAG CTGCGTAATT GATGCCGATG GCTTAGATGA ATCGGTAGAG
ATTCTAACGG CAGATGTTGC ATCTTTAAGC AACCAAGAGA TCTTAAGCAA GATCCAGCAA
GCAGGTATTG CAGGACTGGG CGGCGCAGCT TTTCCGACTC ATATCAAGTT AAGCCCTGCC
AGTGACATCG AACTAGTGAT TATCAATGGT ATCGAGTGCG AGCCTTACAT TACCTCTGAC
GATCGTCTAA TGCGTGAACA CAGCGATGAC ATCCTTGCTG GTATTGCGAT TATCCATAAG
CTACTCAAGC CAAAACGCAT CATTATCGCC ATCGAGGATA ATAAGCCCGA AGCAATTGAA
GCGATGCAAC ATGCGCTTAA TCGCAGCGAG TTAGTGACAG ATAGCGCCAG GATCACTGCA
GTTCCAACCA AATATCCATC TGGTGGTGAA AAACAGCTAA TACAGATCTT AACTGGCCAA
GAAGTGCCAT CAGGCTCTAT TCCTGCCCAG CTCGGTATGT TAGTACAAAA CGTCGGTACG
GCTTACGCCA TCCATGACGC AGTCAGTAAT GGCCATGCTT TGACACGCCG TGTCGTCACA
GTGACAGGCT TAAATAGCCA AACACCAGGC AACTATTGGG TACCCATTGG TACGCCAGTC
AGCCACATTC TCAAGCAGCT TGGTTTTAAT GGCGACTTAG CCACCGATAA AGTCATAATC
GGTGGGCCTA TGATGGGTCA CTCGCTACCC GATATTTCTG CTCCTGTGTT AAAAGGCACA
AACTGCGTTC TGTTACCGAG CAGTGAAGAG ATAGCGCCTG AACAACCAGA GAAACCTTGT
ATTCGCTGTG GCGAATGCGC CGTCGTCTGC CCTAGCCTGC TCTTGCCACA GCAACTATTT
TGGCATGCAA AAGCTGAAGA ATACGATAAA GCCTCAAGCT TTAACCTACA CGACTGTATC
GAATGCGGTT GCTGTAGCTT TGTTTGCCCA AGTGATATCC CATTAGTAGA GTACTACCGT
ATCGCCAAGT CAGCGATACG TACGCAAACA GAAGAGAAAA AACAAGCCGA CTTTGCTAAA
CAGCGCTTCG AAGCTAGATT ACAGCGTCTA GAAGAGGAGA AGCTTGCTCG CGAAGCCAAA
GCTAAAGAGG CAGCAGAGCG CCGTAAGGGC AGTATGTCTA GCGGCGACAG AGACGCTGTT
GCCGAGGCCA TGGCCCGTAT TAAAGCTAAG AAAGCTGCCG ATAGCCAGCA GGCCGAGGTC
ACAGCTTCTG CCGAGGCTCC TTCGGACAAG AAAGCTCAAG TTGCAGCAGC GATTGCCCGT
GCCAAAGCCA AAAAATCAAC TACCAATACA GAAATGAACA CGGTAGATGA TTCTGCTGAG
TCTTCAGCAA CAGATAAGAA AGCACAAATA GCTGCGGCAA TTGCCCGTGC TAAAGCTAAA
AAAGCTGCGC AGGCTGACAC AACTAATACA ACTGAAGAGA GTGAAGCCAG CGGTTTAGAC
AAGGGGGAGG CGCGAGAGGC GCCAGTTGAA ATGCCTGTAG AGATACAAGC TAACAACAAG
AAAGCGCAAA TAGCCGCAGC GATTGCACGT GCTAAGGCTA AGAAAGCTGC ACAAGCTGAG
AAAGCTCAAA CTAGTAACTC CGTAAACTCA GAGACTTTAG AGCATGAGAC TTCAGAATCT
GTGCCTGCTG AAGATGCTAA GAAAGCACGC ATTGCAGCAG CCGTCGCTAA AGCTAAGGCC
AAAAAGCTAG CTTTAACGAC TGAAGTTCAA GCCGCAAAAA CTCAAACTAT AGATGCTCAA
TCTATAGAAG CGAAGGCTAG TGAAACGATA GACAGTGAGA TATCAGAACC TCTGCCTGCT
GAAGATGCCA AGAAAGCACG CATTGCAGCA GCCGTCGCTA AAGCTAAGGC CAAAAAGCTA
GCTTTAACGA CTGATGTTAA AACTGTAGAA GCTCAAGCTG CAGAAACTCA AACTATAGGT
GCTCAATCTG TAGAAGCGAA GGCTAGTGAA GCTCAAGCCA TTAAACCTAT AGATAGTAAA
GCTGTAGACA GTGATACTTC AGAAACTGAT TTTTCTGAAC CTTTGTCAGC CGAAGATGCC
AAGAAAGCAC GCATCGCCGC AGCGGTTGCT AAGGCTAAAG CGAAAAAGAT GCAACAAAAA
TTGCAGGAGA AGGAATAA
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| Protein sequence | MLTLLEQIDK GTLWRSHGGV HPPELKNLSN KTTISELPLA SQFVLPLTQV GDSALLTVKV
GDRVLKGQSL TSGTSFAYSP VHAPTSGVIS QIQPMPSNHP SGIAVLSCVI DADGLDESVE
ILTADVASLS NQEILSKIQQ AGIAGLGGAA FPTHIKLSPA SDIELVIING IECEPYITSD
DRLMREHSDD ILAGIAIIHK LLKPKRIIIA IEDNKPEAIE AMQHALNRSE LVTDSARITA
VPTKYPSGGE KQLIQILTGQ EVPSGSIPAQ LGMLVQNVGT AYAIHDAVSN GHALTRRVVT
VTGLNSQTPG NYWVPIGTPV SHILKQLGFN GDLATDKVII GGPMMGHSLP DISAPVLKGT
NCVLLPSSEE IAPEQPEKPC IRCGECAVVC PSLLLPQQLF WHAKAEEYDK ASSFNLHDCI
ECGCCSFVCP SDIPLVEYYR IAKSAIRTQT EEKKQADFAK QRFEARLQRL EEEKLAREAK
AKEAAERRKG SMSSGDRDAV AEAMARIKAK KAADSQQAEV TASAEAPSDK KAQVAAAIAR
AKAKKSTTNT EMNTVDDSAE SSATDKKAQI AAAIARAKAK KAAQADTTNT TEESEASGLD
KGEAREAPVE MPVEIQANNK KAQIAAAIAR AKAKKAAQAE KAQTSNSVNS ETLEHETSES
VPAEDAKKAR IAAAVAKAKA KKLALTTEVQ AAKTQTIDAQ SIEAKASETI DSEISEPLPA
EDAKKARIAA AVAKAKAKKL ALTTDVKTVE AQAAETQTIG AQSVEAKASE AQAIKPIDSK
AVDSDTSETD FSEPLSAEDA KKARIAAAVA KAKAKKMQQK LQEKE
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