Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_2347 |
Symbol | |
ID | 5664768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 2859892 |
End bp | 2860968 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641236962 |
Product | pyridoxal-5'-phosphate-dependent protein beta subunit |
Protein accession | YP_001502202 |
Protein GI | 157962168 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0031] Cysteine synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.1914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACTAATA CTTGGGTAAA TCAAGCAATC GAAAAAATTG AAGCTGACTT TCAACGAAGT GCAGACACGC ATCTGATCAA GCTAGATACG CCTGGCTTAA ATGGTATTGA TATTTACCTA AAAGATGAAA GTACTCACCC AACAGGAAGT TTAAAACACC GTCTCGCTCG CTCACTCTTT CTTTATGCTC TGTGTAACGG CTGGATAAAG GAAGGCACTA CAGTTATAGA ATCATCTTCT GGCAGTACTG CCGTATCAGA AGCCTATTTC GCACGACTAC TGGGTTTGCC ATTTATTGCC GTCATGCCAA GTACCACAGC TAAGAAGAAA ATCCAGCAAA TTGAGTTTTA TGGCGGTCAA TGCCACTTTG TCGATCACTC GAGTAAGATC TATGCCGAGT CTGAACGTCT CGCTCAGCAA CTCGACGGCC ATTACATGGA TCAGTTCACC TATGCCGAGC GCGCAACGGA TTGGCGAGGA AACAACAATA TTGCTAACTC TATCTTTAAC CAGATGGAAA AAGAGCAATA TTCGATTCCC ACATGGATTG TAATGAGTCC AGGAACGGGC GGAACCTCGG CAACAATCGG TCGCTATATC CGCTATCAAA GATTAACGAC CAAACTGTGT GTGGTCGACC CTGAAAACTC CGTTTTCTTT GATTACTTCA ACACCGGTGA TAAAAACGTT AGTTGTGCGA ATGGTAGTAA GATCGAAGGC ATTGGCAGAC CCCGCGCCGA ACCGTCATTT ATTCCAGGAG TAGTTGATGA GATGCGTAAG ATCCCAGATC CGGCATCGGT CGCTACTATC AATTGGCTAG AGAACATTAT TGGCCGTAAG ACAGGCGCAT CTACTGGCAC CAACCTTTAC GGTGCCCTAC AGCTCGCAAG TGAAATGGCT GCTAAAGGTG AGACAGGCTC TATCGTCACT CTTATTTGTG ACTCGGGTGA ACGCTATTTA GACACTTATT ACAACAATGA GTGGATCAAA GAGAATATCG GCGATCTTAG CGACTATGAA GATGCTTTAG CACATTTTAG CGCGACTTGT GTATTAAATT GCCCAAGTTT GAAATAA
|
Protein sequence | MTNTWVNQAI EKIEADFQRS ADTHLIKLDT PGLNGIDIYL KDESTHPTGS LKHRLARSLF LYALCNGWIK EGTTVIESSS GSTAVSEAYF ARLLGLPFIA VMPSTTAKKK IQQIEFYGGQ CHFVDHSSKI YAESERLAQQ LDGHYMDQFT YAERATDWRG NNNIANSIFN QMEKEQYSIP TWIVMSPGTG GTSATIGRYI RYQRLTTKLC VVDPENSVFF DYFNTGDKNV SCANGSKIEG IGRPRAEPSF IPGVVDEMRK IPDPASVATI NWLENIIGRK TGASTGTNLY GALQLASEMA AKGETGSIVT LICDSGERYL DTYYNNEWIK ENIGDLSDYE DALAHFSATC VLNCPSLK
|
| |